Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201106"

Accession numberr201106 [export]
Locus nameperoxiredoxin
Descriptionperoxiredoxin
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 501 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 145)
DescriptionSelenocysteine incorporation at UGA codon
ATGCCCTTGA AAGTCCTCGA AAAAGCTCCT GACTTTACGG TAAAAGCCGT AATTCGTGAG CGCCAGATCA CCTTTAAGCT CAGCGATTAT CTCGGCCAGA AGCACGTCGT GCTCGCGTTC TACCCGCTCG ACTGGACACC GGTTTGAACC GCCCAAATGC CGGCGTACCA GGTCGAACTC GACAAGTTCG CCGGCTACGA TGCCCAGGTC GTGGGCATTA GCATCGACAC TATCTACAGC CACATGGCGT GGCAGCAAAA AGAGACCGGC TGGATGGATT ACCCGCTCGC CTCTGACTTC TACCCGCACG GCGCCGTCGC GCAGCTCTAC GGAGTCTTCC GCGAGAAGCC GCCAATCCCC GGCATCAACG AACGCGCGAT CTTTGTGATC GACAAAGAAG GCATCATCCG CTTTTCGAAG GTTTATGACC TCGGACAGCA ACCGCCAAAC GAGGAAGTGT TTGAAGTACT GGAGAAGCTG AAGAACGCAC CGCAATCTTG A

Product

Productperoxiredoxin
Descriptionperoxiredoxin
Modifications145..147,aa:Sec
MPLKVLEKAP DFTVKAVIRE RQITFKLSDY LGQKHVVLAF YPLDWTPVUT AQMPAYQVEL DKFAGYDAQV VGISIDTIYS HMAWQQKETG WMDYPLASDF YPHGAVAQLY GVFREKPPIP GINERAIFVI DKEGIIRFSK VYDLGQQPPN EEVFEVLEKL KNAPQS