Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201109"

Accession numberr201109 [export]
Locus nameRhodanese-related
DescriptionRhodanese-related
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismCandidatus Koribacter versatilis [details]

Sequence

VariantCandidatus koribacter versatilis ellin345
GenBank IDs
SequenceDNA of 972 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 805)
DescriptionSelenocysteine incorporation at UGA codon
GTGGGTGAGC TCGGCCATTT TTTAGAAGTC TACGGATACC TGGTCATATT TATATGGGTA TTCGCCGAGC AGGTCGGACT CCCCATTCCC GCTCTTCCAT TGCTGCTGTC CGCAGGCGCC CTGGCATGGC ATGGCAGACT CAGTTTTCCG GTCGCGCTCA TTACAGCTCT GATGGCCTGT CTCGCCGCTG ACACGTTCTG GTACGAACTC GGCAAGCGCC GAGGATCCGC CGTTCTGAAT GTGCTCTGCA AAATGTCTCT CGAGCCCGAC TCGTGCGTGG AGCGCACCCG AGGCGTCTTC GACCGCCGTG GTCCACGCTC CCTCCTCTAC TCGAAGTTTG TGCCGGGACT CAATACGGTA GCCGCGCCGA TTGCCGGCAT GTCGCGCATC TCCTACGAAA AATTCTTGCT GTTCGACATT CCGGGTTCGC TCTTGTGGTC TGGAACATTG CTTCTTCTCG GCTATTTATT CAGCGAGCGC GTCGATGCGA TTCTTCAGCA TTCGCAAATG GTCGGGCGTT TCCTGTTCAT GGCTGCGGTG CTGGTTGTTA TCGGCTGGAT CCTTTGGAAA TACGAGCAAC GGCGACGTTT TCTTAAGTCC GTGAGCATCG GCCGCATTAC GCCCGAGGAA CTGCACTCGA AGCTGATCGC CGGCGAAACG CCCACGATCA TCGACCTGCG CCATCCGCTC GACGTTCTCA CGGATCCACG GGTGATTCCC GGCGCATTGC AAATCCGCAT GGACGATCTC GCGAAACGAG CCAAGGAAAT CCCGCGCGAT CGCGAAATCA TTTTGTACTG TACTTGACCA AACGAAGCTA GCAGCGCCCG TGCGGCGCTG GAACTGAGGA AGGTCGGGAT ACGGCAGGTG CGTCCACTGG CTGGTGGGCT GAATGAATGG AAGCGTCTGA ACCTTCCGCT TACCGAAGAA CAACTGATCC AGTTGGGAAC GGCCGTGACC GGCGACGCCT AA

Product

ProductRhodanese-related
DescriptionRhodanese-related, Sulfurtransferase homologous to a rhodanese-like protein
Modifications805..807,aa:Sec
VGELGHFLEV YGYLVIFIWV FAEQVGLPIP ALPLLLSAGA LAWHGRLSFP VALITALMAC LAADTFWYEL GKRRGSAVLN VLCKMSLEPD SCVERTRGVF DRRGPRSLLY SKFVPGLNTV AAPIAGMSRI SYEKFLLFDI PGSLLWSGTL LLLGYLFSER VDAILQHSQM VGRFLFMAAV LVVIGWILWK YEQRRRFLKS VSIGRITPEE LHSKLIAGET PTIIDLRHPL DVLTDPRVIP GALQIRMDDL AKRAKEIPRD REIILYCTUP NEASSARAAL ELRKVGIRQV RPLAGGLNEW KRLNLPLTEE QLIQLGTAVT GDA