Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201110"

Accession numberr201110 [export]
Locus namefdhA
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismActinobacillus pleuropneumoniae [details]

Sequence

GenBank IDs
SequenceDNA of 3060 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 586)
DescriptionSelenocysteine incorporation at UGA codon
ATGCAGATCT CAAGACGTAA GTTCTTTAAG GTCTGTGCAG GTGGTATGGC GGGTACTTCT GCGGCGATGT TGGGCTTTGC CCCGGCAACC GCATTGGCAG CCCCGCGCGA ATATAAACTT TTGCGTGCAA AAGAAACTCG CCAAACCTGT ACATACTGTT CTGTCGGCTG TGGTATGTTG ATGTATAGCC TCGGCGACGG TGCAATGAAT TCAAGAGGAA AACTTTTCCA TGTGGAAGGC GATCCTGACC ATCCGGTAAG TCGCGGCGCA CTTTGTCCTA AAGGCGCAGG CGTATTAGAC TATGTAAACA GTCCGAATCG TTTACAATAT CCTGAATACC GCGCGCCGGG TTCGGATAAA TGGGAACGAA TTTCTTGGCA CGACGCGATT CATCGTATTG CAAAATTAAT GAAAGAAGAC CGCGATGCGA ACTGGCAAGA TGTCAATGAA GAAGGAACTG TCGTCAATCG TTGGACCACC ACCGGTTTAC TTTGCGGTTC CGCAACAAGT AACGAAACCT CTCTTGTTTC CCAAAAGTGG GCTCGTGCGC TCGGTTTAGT TGTAATCGAC CAAGTAGCGA GTACCTGACA CGGACCAACG GTAGCAAGTC TTGCTCCAAC ATTTGGTCGC GGTGCCATGA CAAACCACTG GGTGGATATC AAAAATGCGG ACGTAGTGGT AGTAATGGGC GGTAATGCCG CTGAAGCTCA CCCTGTCGGT TTCCGCTGGG CAATCGAAGC GAAAAAACAA AACGGTGCGA AGTTAATGGT GGTTGATCCG CGCTTTAACC GTACGGCATC CGTTGCGGAT TTCTATTCTC CGATTCGTTC CGGTACGGAT ATTACGTTCT TATCAGGCGT AATCAAATAC CTACTCGATA ACGATAAAAT TCAACACGAA TACGTTAAAC ATTACACGAA CGCAAGTTTC TTAATTAACG AAGGTTTTGG TTTTGAAGAC GGTTTATTTA CCGGTTACGA CGAAGTAAAA CGTAGCTACG ATAAATCGAC TTGGACTTAT CAGCTTGATG AAAACGGTCA GCCGAAACGT GATATGACGT TACAAGATCC GCGTTGTGTT ATCAATTTAT TGAAAAAACA CGTTGAACGT TATACACCGG AAATGGTGGA ACGTATTTGC GGTACCAAAC AAGACAAATT CTTAGAATTT GCTCAAACCA TCGCATCAAC GGCTACACCG GAAAGAACAA CGACATTCTT ATATGCGTTA GGTTGGACAC AACATACGAT TGGTTCGCAA AATATTCGTA CCATGGCGAT CATCCAATTG CTATTAGGTA ATATCGGTAT GGCAGGCGGC GGCGTAAACG CATTACGCGG TCACTCGAAC GTACAAGGTA CGACTGATAT GGGCTTATTC CCTCATATGT TACCGGGTTA TATTCCGTTA CCGACAGAAT CGGATAAAAC GCTTGAATCG TTCTTAAATC GTATTACGCC GAAAACAGCG GTGGAAGGTC AGGTAAACTA CTGGCAAAAC ACCCCGAAAT TTATGGTGAG TATGCTGAAA TCGTTCTACG GCGATAAAGC GACCAAAGAC AACGAATTCG GTTATCACTA TTTACCGAAA CAGTTGAAAT ACCGTTTAGA CCATCTTCGT TTTATTGACA TGATGGATGA AGGTAAAGTA ACCGGTTATC TCTGCCAAGG TTATAACCCG TTAGCGTCTT ACCCTGACTC AAACAAAATT TCAAGTGCAT TACGTAAATT AAAATTCTTA GTCATTATGG ATCCGTTAGC GACCGATACT TCGGAGTTCT GGAAAAACCA TGGTGAATTA AATGATGTGA ACCCGGCGGA AATTCAAACC GAAGTATTCC GTTTACCAAG TATTTGTTTT GCGGAAGAAG ACGGTTCGAT TGCAAACTCA GGTCGTTGGC TACAATGGCA CTGGAAAGCG ACCGAACCAC CGAAAGAAGC AAAACCGGAT GTAGATATCC TTGCCGAAAT CCGTGAAGTG ATGATGGAAA TGTATCACAA AGAAGGCGGT AAAGGTTTAG AAAGCTTTGA AGCGATGAGC TGGAATTATG CGAATCCGCT CGAGCCGAAA GCGGACGAAA TTGCGAAAGA AAACAACGGT TACGCATTAG AAGATCTTTA TGATGCTAAC GGTAACTTAG TTGCGAAAAA AGGCGATTTA CTTTCAAGTT TCGCCTTACT TCGTAATGAC GGTTCGACCT CTTCCGCTTG CTGGATTTAT ACCGGTCAAT GGACGCAAAA AGGTAACCAA ATGGCAAACC GTGATAACTC CGACCCTTCA GGTCTAGGTA ATACGCTAGG TTGGTCGTTT GCATGGCCTG CTAACCGTCG TGTTCTCTAT AACAGAGCAT CAGCGGACTT AACGGGTAAA CCTTGGAACC CTAAACGTCA GTTAATTAAA TGGAACAGTA AAAACTGGAA CTATATTGAT GTAGCGGACT TCGGTACTGC GGCACCGAAT ACTTCCGTAT CACCATTTAT CATGACAAAT GACGGTGTTT CGCATTTATT CGCACCGCAA TTGGCTGAAG GTCCGTTCCC AGAACACTAT GAACCGATTG AAACGCCGAT TGGTACTAAC CCGTTACACC CGAATGTGGT TTCAAACCCG GTTGCACGTA TTTTACCGCG TGATAAAGAT CGCTTCGGTA CGGCGGACGA GTTCCCATTC GTAGGAACAA CCTATCGTTT AACCGAGCAT TTCCACTGGT GGACTAAACA CTCGCAATTA AACATGATTA CACAGCCTGA GCCGTTCGTA GAAATCAGCG AACAACTTGC CGCGCTCAAA GGTATCAGTC ATGGCGATAC GGTAAAAATT ACTTCAAAAC GCGGTTATAT TAAAACTAAA GTTGTAGTAA CTAAACGTAT TAAACCGCTT ATGGCGGACG GAAAAGAAAT CCATACGGTC GGTATCCCGA TTCACGGCGG ATTTAAATCG GCGGGTAATA AAGGTCACCT TGCCAATAGA CTTACAGGTC GTGTCGGTGA CGGTAATACT TTAACGCCTG AATATAAAAC GTTCCTTGTG AACATTGAGA AAGTTTCGGA GGTGGCATAA

Product

ProductfdhA
DescriptionfdhA
Modifications586..588,aa:Sec
MQISRRKFFK VCAGGMAGTS AAMLGFAPAT ALAAPREYKL LRAKETRQTC TYCSVGCGML MYSLGDGAMN SRGKLFHVEG DPDHPVSRGA LCPKGAGVLD YVNSPNRLQY PEYRAPGSDK WERISWHDAI HRIAKLMKED RDANWQDVNE EGTVVNRWTT TGLLCGSATS NETSLVSQKW ARALGLVVID QVASTUHGPT VASLAPTFGR GAMTNHWVDI KNADVVVVMG GNAAEAHPVG FRWAIEAKKQ NGAKLMVVDP RFNRTASVAD FYSPIRSGTD ITFLSGVIKY LLDNDKIQHE YVKHYTNASF LINEGFGFED GLFTGYDEVK RSYDKSTWTY QLDENGQPKR DMTLQDPRCV INLLKKHVER YTPEMVERIC GTKQDKFLEF AQTIASTATP ERTTTFLYAL GWTQHTIGSQ NIRTMAIIQL LLGNIGMAGG GVNALRGHSN VQGTTDMGLF PHMLPGYIPL PTESDKTLES FLNRITPKTA VEGQVNYWQN TPKFMVSMSK SFYGDKATKD NEFGYHYLPK QLKYRLDHLR FIDMMDEGKV TGYLCQGYNP LASYPDSNKI SSALRKLKFL VIMDPLATDT SEFWKNHGEL NDVNPAEIQT EVFRLPSICF AEEDGSIANS GRWLQWHWKA TEPPKEAKPD VDILAEIREV MMEMYHKEGG KGLESFEAMS WNYANPLEPK ADEIAKENNG YALEDLYDAN GNLVAKKGDL LSSFALLRND GSTSSACWIY TGQWTQKGNQ MANRDNSDPS GLGNTLGWSF AWPANRRVLY NRASADLTGK PWNPKRQLIK WNSKNWNYID VADFGTAAPN TSVSPFIMTN DGVSHLFAPQ LAEGPFPEHY EPIETPIGTN PLHPNVVSNP VARILPRDKD RFGTADEFPF VGTTYRLTEH FHWWTKHSQL NMITQPEPFV EISEQLAALK GISHGDTVKI TSKRGYIKTK VVVTKRIKPL MADGKEIHTV GIPIHGGFKS AGNKGHLANR LTGRVGDGNT LTPEYKTFLV NIEKVSEVA

Publication