Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201112"

Accession numberr201112 [export]
Locus namefdhA
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAeromonas hydrophila [details]

Sequence

GenBank IDs
SequenceDNA of 2145 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 418)
DescriptionSelenocysteine incorporation at UGA codon
ATGAAAAAAG TCATTACCGT GTGCCCCTAT TGCGGCACCG GTTGCAAGAT CAACCTGCTG GTTGAAAACG ACAAGGTGGT GGGGGCCGAA GGCGCCAACG GCCGGACCAA CGAGGGGCAG CTCTGCCTCA AGGGCTATTA CGGTTGGGAT TTCTTGAACG ACACCAACCT GCTGACCCCC CGTCTCAAGA GCCCGATGAT CCGCCGCGAG CGCGGTGGCA AGCTCGAAGC CGTCTCCTGG GACGAAGCCA TCGAGTTCGC CAGCAGCCGC CTCTCGGCCA TCAAGGCGAA ATATGGCCCG GACGCCATCA TGACCACTGG CTCTGCCCGT GGCCCCGGCA ATGAAGCCAA CTATGTGATG CAGAAATTTG CCCGCGCCGT GCTGGGGACG AACAACGTCG ACCACTGCGC GAGGGTGTGA CACGCACCCT CAGTCTCCGG TCTGGAGACA ACAGTAGGCA ACGGCGCCAT GAGCAACGCC ATTCCCGAAA TTCAAGAGAC CAAGTGCCTG CTGGTGTTTG GTTACAACGC TGCTGACTCT CACCCCATCG TCGCCCGCCA TATCCTCAAG GCGAAGGCAA ACGGGGCCAA GGTGATTGTG TGTGATCCCC GAATGGTGGA GACCGCCCGC ATCGCCGATC AGTGGCTGCC GCTCAAAAAC GGTTCCAATA TGGCGCTGGT CAACGCCTTC GCCAACGTCT TGATCAATGA AGGGCTCTAC AACAAGGAGT TCGTCGCCAA CTACACCGAA GGGTTTGACA CCTTCAAGGC CACGGTGGCC AAGTACACCC CGGAATACGT GGAGGGGATC ACCGGCCTCA AAGCCGCCGA TATCCGCGCC GCCATTCGCA CCTATGCCGC ATCGCCTGCT TCCATGATCC TGTGGGGCAT GGGGGTGACC CAGTACGGTC AGGCGGTGGA CGTGGTCAAG GGGCTCGCGG GTATTGCGCT GCTGACCGGC AACTTCGGTC GCCGTGGCAC TGGCTGTGGG CCGGTACGCG GTCAGAACAA CGTGCAGGGT ACCTGCGACA TGGGGATGCT GCCGCACCAG TTCCCGGGCT ATCAGTCGGT GAGCGATCCT GCCATCAGCG CCAAGTTTGC CAAGGCGTGG GGGGTGGATG CGCTCTCCCA GAAACCGGGT TATCGGCTGA CCGAGCTTGG CCACAAGGTG GAGGAGGGCA AGTGCAAGGC CTTCTACATC TTCGGGGAAG ATCCGGCGCA GACCGAGGCC GATCTCGGTC AGTTCCGCCG TACCCTGGCG GGGATGGAGC TGGTGATCGT GCAGGATATC TTCATGACCC AGACCGCCGA GATGGCGGAT GTGATCCTGC CCGCCACCAG CTGGGGCGAG CACGAGGGGG TTTACAGCTC GGCGGATCGC GGCTTCCAGC GCTTCTACAA GGCGGTCACT CCCCCTGATA ACGTGAAACC GGACTGGGCC ATCTTCTCGC TGATGGCGAC CGCCATGGGG TATCCCATGG AGTATCGCGA CACCGAGCAG ATCTGGGACG AGCTGCGCGG ACTCTGCCCG CTCTACGCCG GGGTCAGCTA TGACAAGATG GCCGATCTCA AGAGCGTGCA GTGGCCCTGT CCGACCGAGG ATCACCCGGG CACCAGCACC CTGTTCGAGG GGAACGTGTT CACCACCCCG AGCGGCAAGG GTCAGCTGAT TGCCTCCGAG TGGCGGCCGC CGCTGGAGCA GCCCTGTGCC GAGTACCCGC TGGTGCTCTC CACCGTGCGC GAGGTGGGTC ACTACTCCTG CCGCTCCATG ACCGGCAACT GCTCGGCGCT GCAAACCCTG GCCGATGAGC CGGGCTATGT GCAGATCCAC CCGAGCGATG CCAAGAAGCT CGGGGTGAAG GATCAGGCGC TGGTCTGGAT CTCGTCGCGG CGCGGCAAGG TGATCACCCG GGCCAACTAC AACGAGCGGG TCAACGCCGG GGTGGTCTAC ATGACCTACC AGTGGTGGAT AGGGGCCTGC AACGAGCTCA CCATCGAGCA CGTTGACCCT GTCTCCTACA CGCCGGAGTA CAAGTACTGC GCAGTGAAAA TTGAGCGTAT CGAGGATCAG CCGGGGGCGG AAGTGTACGT CCAGACTGAA TACAGCGCGC TCAAGGCGAA ATTGCGCAGC GCCGCCAAAG GGTAA

Product

ProductfdhA
Descriptionformate dehydrogenase, alpha subunit
Modifications418..420,aa:Sec
MKKVITVCPY CGTGCKINLL VENDKVVGAE GANGRTNEGQ LCLKGYYGWD FLNDTNLLTP RLKSPMIRRE RGGKLEAVSW DEAIEFASSR LSAIKAKYGP DAIMTTGSAR GPGNEANYVM QKFARAVLGT NNVDHCARVU HAPSVSGLET TVGNGAMSNA IPEIQETKCL LVFGYNAADS HPIVARHILK AKANGAKVIV CDPRMVETAR IADQWLPLKN GSNMALVNAF ANVLINEGLY NKEFVANYTE GFDTFKATVA KYTPEYVEGI TGLKAADIRA AIRTYAASPA SMILWGMGVT QYGQAVDVVK GLAGIALLTG NFGRRGTGCG PVRGQNNVQG TCDMGMLPHQ FPGYQSVSDP AISAKFAKAW GVDALSQKPG YRLTELGHKV EEGKCKAFYI FGEDPAQTEA DLGQFRRTLA GMELVIVQDI FMTQTAEMAD VILPATSWGE HEGVYSSADR GFQRFYKAVT PPDNVKPDWA IFSLMATAMG YPMEYRDTEQ IWDELRGLCP LYAGVSYDKM ADLKSVQWPC PTEDHPGTST LFEGNVFTTP SGKGQLIASE WRPPLEQPCA EYPLVLSTVR EVGHYSCRSM TGNCSALQTL ADEPGYVQIH PSDAKKLGVK DQALVWISSR RGKVITRANY NERVNAGVVY MTYQWWIGAC NELTIEHVDP VSYTPEYKYC AVKIERIEDQ PGAEVYVQTE YSALKAKLRS AAKG

Publication