Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201113"

Accession numberr201113 [export]
Locus namefdhA
Descriptionformate dehydrogenase
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAeromonas salmonicida [details]

Sequence

GenBank IDs
SequenceDNA of 2145 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 418)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAAAAAAG TCATTACCGT CTGCCCCTAT TGCGGCACCG GTTGCAAGAT CAACCTGCTG GTTGAAAACG ACAAGGTGGT GGGGGCCGAA GGCGCCAACG GCCGGACCAA CGAGGGGCAG CTCTGCCTCA AGGGTTATTA CGGTTGGGAT TTCCTCAACG ACACCAACCT GCTGACCCCC CGTCTCAAGA GCCCGATGAT CCGCCGCGAG CGCGGTGGCA AGCTCGAATC CGTCTCCTGG GATGAGGCGA TCGACTTTGC CAGCAGCCGT CTGTCTGCCA TCAAGACGAA GTACGGTGCC GACGCCATCA TGACCACCGG CTCGGCCCGT GGCCCTGGCA ACGAAGCCAA CTATGTGATG CAGAAATTTG CCCGCGCTGT GCTGGGGACG AACAACGTCG ACCACTGCGC GAGGGTGTGA CACGCACCCT CAGTCTCCGG TCTGGAGACA ACTGTAGGCA ACGGCGCCAT GAGCAACGCC ATTCCCGAAA TTCAAGAGAC CAAGTGCCTG CTGGTGTTTG GTTACAACGC TGCTGACTCT CACCCCATAG TCGCCCGCCA TATCCTCAAG GCGAAGGCGA ACGGGGCCAA GGTGATTGTG TGTGATCCCC GCATGGTGGA AACCGCCCGT ATCGCCGATC AGTGGCTGCC GCTCAAAAAC GGATCCAACA TGGCGCTGGT CAACGCCTTC GCCAACGTGT TGATCAGTGA AGGGCTCTAC AACAAGGAGT TCGTCGCCAA CTACACCGAG GGGTTTGACA CCTTCAAGGC CACGGTCGCC AAGTACACCC CGGAATACGT GGAGGGGATC ACCGGCCTCA AAGCCGCTGA TATCCGCGCC GCCATTCGCA CCTATGCTGC CTCGCCTGCT TCCATGATCC TGTGGGGCAT GGGGGTGACC CAGTACGGTC AGGCGGTGGA TGTGGTCAAG GGGCTCGCGG GTCTGGCGTT GCTGACCGGC AACTTCGGTC GCCGTGGCAC CGGCTGCGGT CCGGTGCGCG GGCAGAACAA CGTGCAGGGC ACCTGTGACA TGGGGATGCT GCCACACCAG TTCCCGGGCT ATCAGTCGGT GAGCGATCCT GCGATCAGCG CCAAGTTTGC CAAGGCGTGG GGCGTACCGG CGCTCTCCCA GAAGCCCGGC TACCGTCTGA CGGAGCTTGG CCACAAGGTG GAGGAGGGCA AGTGCAAGGC CTTCTATATC TTTGGCGAAG ATCCGGCGCA GACTGAAGCC GATCTGGCCC AGTTCAGGCG CACCCTGGGC GGCATGGAGC TGGTGATAGT GCAGGACATC TTCATGACCC AGACCGCCGA GATGGCGGAT GTGATCCTGC CCGCCACCAG TTGGGGTGAG CACGAGGGGG TTTACAGCTC GGCAGATCGC GGCTTCCAGC GCTTCTACAA GGCAGTTACG CCACCCGAGA ACGTGAAACC GGACTGGGCA ATCTTCTCGC TGATGGCCAC CGCCATGGGG TACCCCATGG AGTATCGCGA CACCCAACAG ATCTGGGACG AGATGCGCGC CCTTTGCCCG CTCTATACCG GGGTCAGCTA CGACAAGATA GCGGATCTCA AGAGCGTGCA GTGGCCTTGC CCGACCGAGG ATCACCCGGG CACCAGCACC CTGTTCGAGG GGAATGTGTT CACCACCCCG AGTGGCAAGG GCCAGCTGAT TGCCTCCGAG TGGCGTGCGC CGCTGGAGCA GCCTTGTGCT GAGTATCCGC TGGTGCTCTC CACCGTGCGG GAGGTGGGAC ACTACTCCTG CCGCTCCATG ACAGGCAACT GCTCGGCGCT GCAGACCCTG GCCGATGAGC CCGGCTATGT GCAGATCCAC CCGAGCGATG CGCAAAAGCT TGGGGTGAAG GATCAGGCGC TGGTGTGGAT CTCGTCGCGA CGCGGCAAGG TGATCACCCG GGCCAACTAC AACGAGCGGG TCAACGCCGG TGTGGTCTAC ATGACCTACC AGTGGTGGAT CGGGGCGTGC AACGAGCTGA CCATAGAGCA CCTTGATCCC GTCTCCTACA CCCCCGAGTA CAAGTACTGC GCGGTGAAGA TTGAGCGTAT TGAGGATCAG CCTGAGGCGG AAGTGTACGT CCAGACTGAA TACAGCGCGC TCAAGGCGAA ATTGCGCAGC GCCGCCAAGG GGTAA

Product

ProductfdhA
Descriptionformate dehydrogenase
Modifications418..420,aa:Sec
MKKVITVCPY CGTGCKINLL VENDKVVGAE GANGRTNEGQ LCLKGYYGWD FLNDTNLLTP RLKSPMIRRE RGGKLESVSW DEAIDFASSR LSAIKTKYGA DAIMTTGSAR GPGNEANYVM QKFARAVLGT NNVDHCARVU HAPSVSGLET TVGNGAMSNA IPEIQETKCL LVFGYNAADS HPIVARHILK AKANGAKVIV CDPRMVETAR IADQWLPLKN GSNMALVNAF ANVLISEGLY NKEFVANYTE GFDTFKATVA KYTPEYVEGI TGLKAADIRA AIRTYAASPA SMILWGMGVT QYGQAVDVVK GLAGLALLTG NFGRRGTGCG PVRGQNNVQG TCDMGMLPHQ FPGYQSVSDP AISAKFAKAW GVPALSQKPG YRLTELGHKV EEGKCKAFYI FGEDPAQTEA DLAQFRRTLG GMELVIVQDI FMTQTAEMAD VILPATSWGE HEGVYSSADR GFQRFYKAVT PPENVKPDWA IFSLMATAMG YPMEYRDTQQ IWDEMRALCP LYTGVSYDKI ADLKSVQWPC PTEDHPGTST LFEGNVFTTP SGKGQLIASE WRAPLEQPCA EYPLVLSTVR EVGHYSCRSM TGNCSALQTL ADEPGYVQIH PSDAQKLGVK DQALVWISSR RGKVITRANY NERVNAGVVY MTYQWWIGAC NELTIEHLDP VSYTPEYKYC AVKIERIEDQ PEAEVYVQTE YSALKAKLRS AAKG

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