Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201120"

Accession numberr201120 [export]
Locus nameGrdB
DescriptionGlycine reductase selenoprotein B
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus metalliredigens [details]

Sequence

GenBank IDs
SequenceDNA of 1311 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAGCAAAA AGAGAGTTGT TCATTATATT AATCAATTCT TCGCCGGGAT TGGTGGAGAA GAAAAAGCGG ACATAAAGCC AGAAGTAAGA GAAGGTATTG TAGGACCAGG AATGGCTTTA GAGAGCGCAT TAAAAGATGA AATAGAAATA GTTGCAACGA TTATTTGCGG TGATTCCTAT TTTAACGAAA ACGTAGAAGA AGCAAAGGCT GAAGTCATAA AGATGGTAAA GCAGTATAAG CCTGATCTAT TTATTGCAGG CCCTGCTTTT AACGCCGGAC GCTATGGTGT TGCATGCGGA ACCATTGCTA AGGAAGTAAA TGATCAGTTA GGAATCCCTG TATTAACAGG AATGTACCCA GAAAACCCAG GTGCAGATAT GTATAAAAAG AGTGTTTACA TTATAGAAAC TGGTAATTCT GCGGCAACAA TGAGAAAAGC CATTCCAGCT ATGGCCGCTC TTGCCCTTAA GATGTTAAAA GGAGAATCAA TTGGTTCTCC AGAAGACGAT AAATATATTT CCCGAGGAAT CAGGAAGAAT TACTTCGCCG AAGAGAGAGG CGCTAAGCGT GCAGTTGATA TGCTGATGAA GAAGTTAAAT AAAGAAGACT TCGTAACGGA ATATCCAATG CCAGACTTTG ATCGCGTAGA GCCAAATCCA GCAGTGAAGG ACTTAAGTAC TGCGAAGATC GCATTGGTTA CATCTGGCGG TATTGTACCA AAGCATAACC CAGATAGGAT TGAATCTTCT AGTGCATCTA AATATGGAAA ATATGATATT TCACAGTTTA AGGATTTAAC GGAAGCAGAT CATGAAACCG CTCATGGTGG CTATGATCCT ACCTATGCCA ATACAGATCC TGATCGTGTT TTACCAGTAG ATGTATTAAG AGACTTAGAA ACAGAGGGCA TCATTGGCAA ATTACACAAG TACTTTTACA CAACAGTGGG TAATGGGACT TCAGTTGGAA GCTCTAAACT CTTTGCAGCT GAATTTGCAA AGGAATTAGT GGCTGATGGT GTGACCGCCG TTATCCTCAC ATCTACGTGA GGCACCTGTA CACGTTGCGG TGCAACGATG GTGAAAGAGA TTGAAAGAGC AGGAATTCCT GTAGTACACA TGTGTACAAT TGTACCCATT TCCTTAACGG TTGGAGCGAA TCGAATTGTA CCCACAATTG CAATTCCACA TCCATTAGGA AATCCAGCAT TAGATGAAAA AGATGAAAAG AGCTTACGAA AAAAATTAGT TGTAAAAGCC CTAAAGGCCT TAACAACTGA AGTTGATGGT CAAACAGTAT TTGAAGATTA A

Product

ProductGrdB
DescriptionGlycine reductase selenoprotein B
Modifications1048..1050,aa:Sec
MSKKRVVHYI NQFFAGIGGE EKADIKPEVR EGIVGPGMAL ESALKDEIEI VATIICGDSY FNENVEEAKA EVIKMVKQYK PDLFIAGPAF NAGRYGVACG TIAKEVNDQL GIPVLTGMYP ENPGADMYKK SVYIIETGNS AATMRKAIPA MAALALKMLK GESIGSPEDD KYISRGIRKN YFAEERGAKR AVDMLMKKLN KEDFVTEYPM PDFDRVEPNP AVKDLSTAKI ALVTSGGIVP KHNPDRIESS SASKYGKYDI SQFKDLTEAD HETAHGGYDP TYANTDPDRV LPVDVLRDLE TEGIIGKLHK YFYTTVGNGT SVGSSKLFAA EFAKELVADG VTAVILTSTU GTCTRCGATM VKEIERAGIP VVHMCTIVPI SLTVGANRIV PTIAIPHPLG NPALDEKDEK SLRKKLVVKA LKALTTEVDG QTVFED