Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201124"

Accession numberr201124 [export]
Locus nameRnfC
DescriptionRnfC
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus metalliredigens [details]

Sequence

GenBank IDs
SequenceDNA of 1287 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1174)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAATATCG TCTTACCATT AAAACAACAT GTAGGTGCAC CGTGCAAGCC ACTGGTGAAA ACAGGTGATC TAGTCAAAAA AGGACAATTG ATTGCTGTGC CAGAGGGCTT AGGTGCCAAC ATACATGCCA GTATATATGG AACTGTTGAT CGTATTAATG AAGAATGCAT TATCATTACT CCTGATAAAC AGCAACCAGA AGCATATATA AAGATTAAGG AAACCAAGGA CAATCTAAAG GCCATTGAAG AAGCTGGAAT TGTAGGAGCT GGAGGCGCAG GGTTTCCTGC CCATATAAAA CTGAATACGG ATCTGAAGGG TGGATATGTT ATTGTCAATG GTGCTGAATG CGAACCACTT TTAGCACATA ACTTGAAACT AATGGAGGAA AGCCCAGAGG TCATTATTAG AGGGATTAAA TATATCATGG AAATTACCAA TGCAGCTAAA GGATATATCG CTGTAAAGTC AAAATATAAA AAGGCAGTCA GGGGACTCAA AAAAGCCTGT ACAATTGAAA CAGGTATAGA AGTTAAGTTC TTACCTGATA TATATCCTTC GGGAGACGAA AGAGTGATTA TAAGAGAACT TTTAGGTGTT GTATTAGAGC CTGGGAAGTT GCCATTAGAA GCTGGAGCAG TCGTGCAAAA TGTAGAAACC ATAAAGCATA TTGTGAATGC CATAGAATTG AGAAAACCAT TTATTACGAA AGACATTACT GTAGCAGGAC GTGTGCAGAG TGGTAGAAAA GGCAAAGTCT TTTTAGATGT GGCATTAGGA GAACCAGTAG GTAAATATAT TGAGCTTTGT GGCGGTTATG TAATGCCCTA TGGCGAGATA ACCCTAGGGG GACCCTTTAC AGGTAGTGCC GGCAATGAAA AGACCCCCAT TACGAAAACC TTAGGTGGCA TTTTAGTTTC TATGCCTTTT CCACAAGAAA CAAGAAAGAT GGGGATCTTA GCTTGTGAAT GCGGCGCTCA GGAAGAAAGA TTAAGGGAAA TTGCAAATGC TATGGGGGCA GAAGTCATAG CAGCAGAAAA ATGCAAACGA ATGGTAGAAA TAAACGGAAG ATATCGTTGT GATAAACCAG GGGAGTGTCC TGGTCAGGCA GAAAAGATTT TAAGTATGAA GAAAAAAGGA ATACAAGTAT TATTAACTGG AACCTGCGGC GACTGAACTA ACACAGTGAT GAATGTAGCT CCTAGGTTAG GAGTTCCCAC TTACCACAGT ACGGATCATG TACTTAGAGC AACAGGCGAA AGACTAATAA GAAGAACTGA AGAGTAA

Product

ProductRnfC
DescriptionPredicted NADH:ubiquinone oxidoreductase, subunit RnfC
Modifications1174..1176,aa:Sec
MNIVLPLKQH VGAPCKPLVK TGDLVKKGQL IAVPEGLGAN IHASIYGTVD RINEECIIIT PDKQQPEAYI KIKETKDNLK AIEEAGIVGA GGAGFPAHIK LNTDLKGGYV IVNGAECEPL LAHNLKLMEE SPEVIIRGIK YIMEITNAAK GYIAVKSKYK KAVRGLKKAC TIETGIEVKF LPDIYPSGDE RVIIRELLGV VLEPGKLPLE AGAVVQNVET IKHIVNAIEL RKPFITKDIT VAGRVQSGRK GKVFLDVALG EPVGKYIELC GGYVMPYGEI TLGGPFTGSA GNEKTPITKT LGGILVSMPF PQETRKMGIL ACECGAQEER LREIANAMGA EVIAAEKCKR MVEINGRYRC DKPGECPGQA EKILSMKKKG IQVLLTGTCG DUTNTVMNVA PRLGVPTYHS TDHVLRATGE RLIRRTEE