Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201127"

Accession numberr201127 [export]
Locus namefdhA 1
DescriptionfdhA 1
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus oremlandii [details]

Sequence

GenBank IDs
SequenceDNA of 2676 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1045)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGCAAAGA TTATGATCAA TGGCGAAAGT TATGAAGTGA AGAACGACAT CACAATACTT CAGGCATGTA GAGAAATCGG AATCGAGATC CCTACCTTAT GCCACGATGA CCGACTAGAG CCTCACGCAG CCTGTAGATT GTGTATTGTA GAGATTGAAG GCGTAAGAAA TCTATCCACT TCATGCACTA TGAAAGTTGC AGAGGGGATG AACATACAAA CCCACAGCAA AAATGTAATG AATACCAGGA AAGAACTTTT AGACTTACTC TTTTCAAATC ATCCCAACGA CTGTTTAACC TGTGAAAAAT CTGGAGAGTG TAAACTACAG GATTACTGCT ACGAGTACGG CGTTTTAGGT GGCAGCTATA AGGGAGAGAA ACGAAATTTA CCTATAGATT ATAGCAATCA TTTTTATACC TACGATCCAA ATAAATGTAT TCTTTGTGGA AAATGTGTAA GGGTTTGCAG TGAGCTTCAG TGTACCAATG CTATTACCAT CGATGAAAGA GGTTTTCATA CTTCTATTGC CACACCTTTT AGAAAGGGGC TGGAACACTC AACCTGTGTA TCCTGCGGTA ACTGTGTAGC CGTATGTCCA GTGGGTGCTC TTACACCGAA GAAAAGACAG AAGGTTCGAG CTTGGGAGAC AAAAAAAGTT AAAACTACCT GCTCTTATTG TGGGGTAGGG TGTCAACTGA ACCTGATTGT CCATGAGGAT AAGGTCATCG GTGCAGAGCC AGGGAGAGGC GTACCCAATG ATGGGCTTTT ATGCGTAAAA GGTAGATTTG CCAACGCATT TATCAATCAT GAAGAGCGAT TGAAGACGCC GCTCATAAGA AAAAATGGTG TTTTAGAAGA AGCGACATGG GACGAAGCTT TAGGGTTGAT TGTATCTAAG GTACAAAGCA CGAAAGAGAA GCACGGTGCC AACGCTTTAG GTGGATTTTC CTCCGCTCGA TGTACCAATG AAGAAAACTA TTTATTTCAA AAGCTTTTCA GAGCGGTGAT CGGCACCAAT AACGTAGATC ACTGTGCACG ACTCTGACAT TCCGCTACAG TTGCAGGTCT TGCAACAACA CTGGGAAGCG GCGCTATGAC CAATAGCATT GGAGAAGTCG TAAATAATGA CCTTCTTTTC ATTACTGGAA CCAATACCAC AGAAAACCAT CCAGTTATAG GAACGCAGGT GAAGCAGGCA AAGAAAAAAG GTGCAAAGCT GATCGTAGCA GACCCGAGAA GGATTGAGCT TGCAGATATG GCAGATGTAT ATCTGCAAAT AAAGCCGGGT ACCAATATCG CCCTGATGAA CGGTATGCTG AACTATATTA TAGAAAATGA TCTTCACGAT AAAGCTTATA TAGAGGAACG AACAGAGAAC TTTGAAGATG TGAAAGAAAC TGTAAAAGCA TATACCCTCG AAAGAACTGC ACAAATCTGT GGTGTAGCTC CAGAGGATAT TGCAAAGGCA GCCCGAATGT ATGCAGCGTC CGACAGAGCA GGAATCTACT ATGCTATGGG CATCACTCAG CATACAACGG GAACGCACAA TGTAATTTCC GTATCCAACT TGGCTCTTGC TTGTGGCAAT ATAGGGAAGG AATTCGCAGG GGTGAACCCC CTTCGTGGAC AGAACAACGT ACAGGGAGCC TGTGATATGG GTGCCCTGCC GTCGGACTAT CCGGGATACC AAAAAGTATT CAAGCCAGAG ATTGCAGAAA AATTTGAAGC AGCATGGAAT GCAAAACTAT CGAGAGAGGT TGGCTTAACT GTATCTGAAA TGATTCAGAA AGCTGAAACT GGAGATCTTA AGTTCCTGTA TATCATGGGA GAGAACCCAA TGGTATCGGA TCCTGATATC AACCACGTAA AGCACTCCTT AGAAAATATT GATTTCTTAG TAGTTCAGGA TATTTTCCTA ACGGAAACTG CAGAGCTTGC CGATATAGTT CTTCCAGCCG CTTCCTTTGC AGAAAAAGAT GGAACCTTCG TGAATACAGA AAGAAGGGTA CAGAGAGTAC GACAGGCAAT TCCTCCAGTG GGCGGTGCGA AGGCAGACTG GGTCATCCTT ATGGAACTGA TGAATCGTTT AGGTTATAGT AAAACATACG GTCATCCCTC CGAGATCATG GAAGAAATTG CGATGGTTAC ACCGCAGTAC GGGGGTATAT CCTATGAGCG AATAGAAAAG GTTGGAATTC AGTGGCCATG TCCTACCGCA GATCACCCAG GAACGAAGTA TCTGCACAAG GCTGCCATTG CAAGAGGGAG AGGACTATTC TATCCAGTGG AGCATACTGG AAGTGTGGAA ACCAAGGATC GAGAGTATCC ATTCATCCTG ACAACAGGTA GGATACTGTA CCATTACCAT ACCAGAACAA TGACCGGTCG AGAAGAAGGC TTAAATAAGA TCGTGCCCAA TTCCTATATT GAAGTCAACG ATATTACAGC CAATAAACTA GATCTTGAAG ATGGCGAAGT GGTAAAGGTA AGCTCTAGAA GAGGAAGCAT TAAAGTTGCT GTTAAAGTGA CGGATATTGT AGATGAGGAT GTTGTATTTA TTCCTTTCCA CTTTGCTCAG GGTGCTGCTA ACTATTTAAC CAATGCCCAG CATGACCCCA TATCTAAAAT ACCAGAGTTG AAGGTAGCGG CTGTAAAACT AGAAAAAATC GTTTAG

Product

ProductfdhA 1
Descriptionformate dehydrogenase, alpha subunit
Modifications1045..1047,aa:Sec
MAKIMINGES YEVKNDITIL QACREIGIEI PTLCHDDRLE PHAACRLCIV EIEGVRNLST SCTMKVAEGM NIQTHSKNVM NTRKELLDLL FSNHPNDCLT CEKSGECKLQ DYCYEYGVLG GSYKGEKRNL PIDYSNHFYT YDPNKCILCG KCVRVCSELQ CTNAITIDER GFHTSIATPF RKGLEHSTCV SCGNCVAVCP VGALTPKKRQ KVRAWETKKV KTTCSYCGVG CQLNLIVHED KVIGAEPGRG VPNDGLLCVK GRFANAFINH EERLKTPLIR KNGVLEEATW DEALGLIVSK VQSTKEKHGA NALGGFSSAR CTNEENYLFQ KLFRAVIGTN NVDHCARLUH SATVAGLATT LGSGAMTNSI GEVVNNDLLF ITGTNTTENH PVIGTQVKQA KKKGAKLIVA DPRRIELADM ADVYLQIKPG TNIALMNGML NYIIENDLHD KAYIEERTEN FEDVKETVKA YTLERTAQIC GVAPEDIAKA ARMYAASDRA GIYYAMGITQ HTTGTHNVIS VSNLALACGN IGKEFAGVNP LRGQNNVQGA CDMGALPSDY PGYQKVFKPE IAEKFEAAWN AKLSREVGLT VSEMIQKAET GDLKFLYIMG ENPMVSDPDI NHVKHSLENI DFLVVQDIFL TETAELADIV LPAASFAEKD GTFVNTERRV QRVRQAIPPV GGAKADWVIL MELMNRLGYS KTYGHPSEIM EEIAMVTPQY GGISYERIEK VGIQWPCPTA DHPGTKYLHK AAIARGRGLF YPVEHTGSVE TKDREYPFIL TTGRILYHYH TRTMTGREEG LNKIVPNSYI EVNDITANKL DLEDGEVVKV SSRRGSIKVA VKVTDIVDED VVFIPFHFAQ GAANYLTNAQ HDPISKIPEL KVAAVKLEKI V

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