Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201131"

Accession numberr201131 [export]
Locus nameGrdB
DescriptionGlycine reductase selenoprotein B
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus oremlandii [details]

Sequence

GenBank IDs
SequenceDNA of 1308 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAGCAAGA AAAGAGTTGT TCATTATATA AATCAATTCT TTGCTGGAAT TGGTGGAGAA GAAAAAGCTG ATATTAGACC TGAATTAAGA GAAGGCGTCG TTGGGCCAGG TATGGCTTTG AATACCGCAA TGAACGAAGA GGCTGAAATC GTAGCAACGA TTATCTGCGG AGACTCTTAT TTCAATGAGA ATCTAGAAGA AGCAAAAAAT GAAATCATTG AAATGGTGAA AAAATATAAT CCAGACCTAT TTATTGCTGG GCCTGCATTC AATGCTGGTA GATACGGTGT TGCTTGTGGA ACCATTGCGA AAGCAGTAAA TGATGAGCTT GAAATCCCAG TTTTAACAGG TATGTATATA GAAAATCCAG GGGCAGATAT GTTCAAAAAG AACATTTATA TTGTTGAAAC TGGAAATTCA GCAGCTGCCA TGAGAAAAGC AGTGCCTGCA ATGGCATCCC TTGCGGCAAA GTTATTAAAA GGTGAGGCAA TTGGTACACC GAAAGAAGAC CAATATATCC CTAGAGGCAT TCGAAAGAAT TATTTCTCAG AGGAAAAAGG TGCGACAAGA GCTGTCAACA TGCTGATGAA GAAGCTAAAG GGTGAAGAAT TTACAACGGA ATATCCAATG CCTGATTTTG ATCGAGTGGA TCCAAATCCA GCAGTTCAAG ATTTAAGCAA GATCAAAATT GCTATCGTAA CTTCTGGTGG TATTGTACCG AAGGGAAATC CAGAGCGAAT TGAATCTTCA AGTGCCTCCA AATATGGAAA ATATGATATT TCGAGCTTTG ATGATTTAAC AGAGGCAGAC CATGAAACCG CTCACGGTGG ATACGACCCG GTATATGCCA ATATTGATCC AGATAGAGTA ATTCCTGTAG ACGTACTAAG AGATATGGAG AAAGAAGGCG TTATTGGGGA ATTACATAAA TACTTCTATA CAACTGTTGG AAATGGTACA TCCGTTGGAA ACTCTAAGAA ATTTGCTGAA GAATTCGCTA AGGAATTAAT TGCCGATGGC GTTCAGGCAG TTATCTTAAC CTCTACGTGA GGTACTTGTA CACGTTGCGG TGCAACGATG GTAAAAGAAA TTGAAAGAGC AGGAATTCCT GTGGTTCATA TGTGTACAGT AGTGCCAATA TCCCTAACTG TTGGTGCCAA TCGAATTGTA CCTACAGTGG CAATCCCACA TCCATTAGGA AATCCGAATT TGGAGCCGAA AGAAGAGAAG GCATTAAGAA GAAAGCTTGT TGAAAAGGCA CTAGAGGCCT TAACAACAGA AGTAGCTGGG CAAACAGTAT TTGAATAA

Product

ProductGrdB
DescriptionGlycine reductase selenoprotein B
Modifications1048..1050,aa:Sec
MSKKRVVHYI NQFFAGIGGE EKADIRPELR EGVVGPGMAL NTAMNEEAEI VATIICGDSY FNENLEEAKN EIIEMVKKYN PDLFIAGPAF NAGRYGVACG TIAKAVNDEL EIPVLTGMYI ENPGADMFKK NIYIVETGNS AAAMRKAVPA MASLAAKLLK GEAIGTPKED QYIPRGIRKN YFSEEKGATR AVNMLMKKLK GEEFTTEYPM PDFDRVDPNP AVQDLSKIKI AIVTSGGIVP KGNPERIESS SASKYGKYDI SSFDDLTEAD HETAHGGYDP VYANIDPDRV IPVDVLRDME KEGVIGELHK YFYTTVGNGT SVGNSKKFAE EFAKELIADG VQAVILTSTU GTCTRCGATM VKEIERAGIP VVHMCTVVPI SLTVGANRIV PTVAIPHPLG NPNLEPKEEK ALRRKLVEKA LEALTTEVAG QTVFE

Publication