Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201134"

Accession numberr201134 [export]
Locus namePredicted NADH:ubiquinone oxidoreductase, subunit RnfC
DescriptionPredicted NADH:ubiquinone oxidoreductase, subunit RnfC
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus oremlandii [details]

Sequence

GenBank IDs
SequenceDNA of 1275 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1165)
DescriptionSelenocysteine incorporation at UGA codon.
ATGCTTATAA AAATATCATT AAAACAACAT GTGGGCGTAG AAAGTAAAGC CATCGTAAAA GAAAATGAAA AGGTTAAAAA AGGCCAGCTG TTGGCAGTAC CAGATGGATT AGGATCCAAC ATCCATTCCA GTGTACATGG GATTATTGAG AAAGTAACCA GTGAATATGT AAGTATCAAA GCCTATTCCG ATCAATCAGA GGATTATATG ATGATTAAGG CGACGGATAA TTATTTAGAA GCCATAAAGG AGGCTGGGGT AGTAGGCGCG GGGGGCGCAG GTTTTCCTAC ACATATTAAG CTAGATGTAG ATTTGACAGG GGGTTATGTA ATAGTTAATG CGGCAGAATG TGAGCCTGTA TTAAATCATA ATATGCTTGC TATAGAGAAG CAGCCGGACT TAATTCTAAG GGGTTTAAAA TATGTAATGG AAATTACAAA AGCAGCTAAG GGATATATTG CAATTAAGCC TAAGAATAAA AATGCAATCA TTGCGTTAGG TAAAGTTTGT AAGTCAGAGT CCAATATAGA AATTAAATTT TTACCAGATA TGTATCCTGC AGGAGACGAA AGGGTCATCG TAAGAGAGTT GCTGAATGTA GAGTTAAAGC CAGGAAAATT ACCAATTGAA GTAAACACCG TAGTTTTAAA TATTGAAACA ATAAAGAATA TTTGTTTAGC CATTGAGAAG AGAAAGCCTG TAATCACTAA AGATATCACT GTAGGAGGAC GTGTTAAAGC TCCTAAGGTT TTTTTAGAAT CTCCGATCGG ATATCCAGTA TCTTATTTTA TCGATCAATG TGGTGGTTAC GAAAATCCAC ATGGTGAGAT CGTAATTGGA GGGCCTTTCA CAGGTAAAAA GGGAGGGGAA GAAACAACTA TCATTAAAAC CACCGGTGGG ATTTTAGTTG CGATGCCTTT TCCAGTAGAA AAGAGAAAAG TCGGAATTAT AGCCTGTGAG TGTGGCGCAC AAGAAGAAAG ATTAAAAGAA ATTGCAGCTG GTATGGAAGC GGAAGTAGTC GCAGAAGTTC AATGTAAAAG AATGACAGCG TTTAATGGTA GATATCGATG CGATTTGCCA GGAGTATGTC CGGGTCAAGC TGAAAAGGTA CTTTTTTTAA AAAAACAAGG AGCCGAGGTT ATCATTACCG GAACCTGTGA GGACTGAACG AATACAGTCA TGATGACAGC TCCTAGGTTA GGAGTTCCAG TATATCACAG CACAGACCAT GTATTAAGAG GTTCAAACCA TAAATTATAT AGAAAAAAAC AATAA

Product

ProductPredicted NADH:ubiquinone oxidoreductase, subunit RnfC
DescriptionPredicted NADH:ubiquinone oxidoreductase, subunit RnfC
Modifications1165..1167,aa:Sec
MLIKISLKQH VGVESKAIVK ENEKVKKGQL LAVPDGLGSN IHSSVHGIIE KVTSEYVSIK AYSDQSEDYM MIKATDNYLE AIKEAGVVGA GGAGFPTHIK LDVDLTGGYV IVNAAECEPV LNHNMLAIEK QPDLILRGLK YVMEITKAAK GYIAIKPKNK NAIIALGKVC KSESNIEIKF LPDMYPAGDE RVIVRELLNV ELKPGKLPIE VNTVVLNIET IKNICLAIEK RKPVITKDIT VGGRVKAPKV FLESPIGYPV SYFIDQCGGY ENPHGEIVIG GPFTGKKGGE ETTIIKTTGG ILVAMPFPVE KRKVGIIACE CGAQEERLKE IAAGMEAEVV AEVQCKRMTA FNGRYRCDLP GVCPGQAEKV LFLKKQGAEV IITGTCEDUT NTVMMTAPRL GVPVYHSTDH VLRGSNHKLY RKKQ

Publication