Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201137"

Accession numberr201137 [export]
Locus nameSplit soret cytochrome c precursor 1
DescriptionSplit soret cytochrome c precursor 1
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus oremlandii [details]

Sequence

GenBank IDs
SequenceDNA of 672 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 247)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGCAATGG AAGAGAAAAA ACAGATGACA AGAAAAGATT TCCTGAAAAA AGCAGGGATG TCAGTAGCTG GGGTTGCTAT GGCAGGAGGG GTAGGCGGAA TACTTACAGC CTGTACAAAT TCGGGAACAG CTTCAGTAAA TTCAACTGGA ACACCTGATA AACCACAATG GCCATTTAAA TATGTAAAAA TAGACCCAGC AAAAGCAGAA GCAAGAGCTT ATACTGGTTA CAAAGAAAAA GGTGGCTGAG GTGCTGGCGT AGCCGAAGGG TTCTTCGGTA CATTAGCAGA TGAAGCAGGA TATCCATTCA ATCAAATTCC AGCAGAAGCT TTTACAGCTG CAGCTGGTGG ATACGGTCAA GCAACATTAT GTGGTTCTTT AGGAGTTGCG GCGGCATGTA TCGGTATGGT TACAGATGTT GATACACAAA AGAAAATAGT AGGAGAATTA TTTAAATGGT ATAAGACAGC TGAATTCCCT CAGTATCAAC CAGAAGGCTT GGGACTAAAG CATACTGTTG CAGAGTCAAT ACTATGTGAA GATTCTGTAG GTACTTTTAT GAAGGAACAA GGAGTAGCAT ACGGAGATCC TGAAAGAAAA GCTCGTTGCG CAGGAACAGC AGCGGATGTT ACACGTAAGA TGGTAGAGCT TTTAAACGAA ACTTTAGCAT AA

Product

ProductSplit soret cytochrome c precursor 1
DescriptionSplit soret cytochrome c precursor 1
Modifications247..249,aa:Sec
MAMEEKKQMT RKDFLKKAGM SVAGVAMAGG VGGILTACTN SGTASVNSTG TPDKPQWPFK YVKIDPAKAE ARAYTGYKEK GGUGAGVAEG FFGTLADEAG YPFNQIPAEA FTAAAGGYGQ ATLCGSLGVA AACIGMVTDV DTQKKIVGEL FKWYKTAEFP QYQPEGLGLK HTVAESILCE DSVGTFMKEQ GVAYGDPERK ARCAGTAADV TRKMVELLNE TLA

Publication