Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201138"

Accession numberr201138 [export]
Locus nameSplit soret cytochrome c precursor 2
DescriptionSplit soret cytochrome c precursor 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAlkaliphilus oremlandii [details]

Sequence

GenBank IDs
SequenceDNA of 666 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 241)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGATGTAA AGAAAAGCAT AACGAGAAAA GATTTTCTTA AGCGTGCAGG AATGTCAGCA GCAGGTATTG CTATGGCAGG TGGTGTGGGT GGAATACTTA CAGCCTGTAC AAATGCAGGA ACAGCTTCAG TAAATTCAAC AGGAACACCG GATAAGCCAC AATGGCCATT TAAGTATGTA AAGCTAGATC CAGCAAAAGT TGAAGAAAGA GCTTTTAAAG GATATAAAGA AAAAGGTGGC TGAGGTGTTG GCGTAGCCGA AGGGTTCTTC GGTACATTAG CAGATGAAGT AGGATATCCT TTTAATCAGA TTCCAACAGA AGGGTTTACT GCAGCAGCAG GTGGATACGG TATGGCTACA CTATGTGGAT CACTGGGAGT TGCGGCAGCA TGTATCGGTA TGGTTACAGA TGTAGATACA CAAAAGAAAA TAGTTGCAGA CCTATACAAA TGGTACAAAA CATTTGAATT CCCTCAATAT CAGCCAGAGG GCTTAGGATT AAAGCATACT GTTGCAGAGT CTGTATTATG TGAGGATTCT GTTGGAAAGT TTATGAAAGA GCAAGGTGTT GCTTATGGAG ATCCGGAAAG AAAATCTCGT TGCGCAGGAG TAACAGCGGA CGTTACACGT AAAATGGTAG AACTTTTAAA TGAAGCTTTA GCATAA

Product

ProductSplit soret cytochrome c precursor 2
DescriptionSplit soret cytochrome c precursor 2
Modifications241..243,aa:Sec
MDVKKSITRK DFLKRAGMSA AGIAMAGGVG GILTACTNAG TASVNSTGTP DKPQWPFKYV KLDPAKVEER AFKGYKEKGG UGVGVAEGFF GTLADEVGYP FNQIPTEGFT AAAGGYGMAT LCGSLGVAAA CIGMVTDVDT QKKIVADLYK WYKTFEFPQY QPEGLGLKHT VAESVLCEDS VGKFMKEQGV AYGDPERKSR CAGVTADVTR KMVELLNEAL A

Publication