Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201139"

Accession numberr201139 [export]
Locus namefdhA 1
Descriptionformate dehydrogenase
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismAnaeromyxobacter dehalogenans [details]

Sequence

VariantAnaeromyxobacter dehalogenans 2cp-c
GenBank IDs
SequenceDNA of 3291 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 586)
DescriptionSelenocysteine incorporation at UGA codon
ATGCCGAAGC TCCCCGTCCT CTCGGACTGG CCCGTGCTCC GCCAGCTCCG CCACCGCGAT CCGTCGGGCC TGGGCTCGAC CGCCGCGTCC CCGCGCACCC GCTCGCTCGC GCCCCGCACC GCGTCGGCGG ACCGCGTGGC GCGGTCGATC TGCCCCTACT GCGCGGTCGG CTGCGGGCAG CTCGTCTACG TGAAGGACGA GAAGATCATC GACATCGAGG GCGATCCCGA CTCCCCCGTC TCGCAGGGCT GCCTCTGCCC GAAGGGCGCG GCCACGTTCC AGCTCGTGAC CGGCGCGCAC CGGCTTGAGC AGGTGCTCTA CCGCCGGCCC GGCGGCACGT CCTGGGAGAC CCTGCCGCTC GAGCAGGCGA TGGAGATGGT CGCGCAGCGG GTGAAGAAGG CGCGCGACGA GACCTGGCAG GAGCGGGTCG AGGAGGAGGG CGCCGAGCAC CACGGCGATC AGGTGCGGCG CACGCTCGGC ATCGCGCACC TCGGCGGCGC CACGCTCGAC AACGAGGAGA ACTACCTCCT CAAGAAGCTC TTCACCGCCC TCGGCGTGGT GCAGGTGGAG AACCAGGCGC GGATCTGACA CAGCTCCACG GTCCCCGGTC TGGGGATCTC GTTCGGCCGC GGCGGCGCCA CCACCTTCCC CGGCGACCTG CAGAACTCCG ACTGGATCGT CGTGCAGGGC TCGAACATGG CCGAGTGCCA CCCGGTGGCG TTCCGCTGGG TGATGGAGGC GAAGAACCGG GGCGCCACGA TCATCCACGT GGATCCCCGC TTCACCCGGA CCAGCGCGGT GTCCGACCTG CACGTGCCCA TCCGCCCGGG CAGCGACATC GCGTTCCTGG GCGGGATCAT CCACCACGTG CTCGAGCATG ACCTGTGGTT CGAGGAGTAC GTGCGCGCGT ACACCAACGC GAGCACCGTC ATCGACGAGG GCTTCCGCGA CACCGAGGAG CTGGAGGGCT TCTTCAGCGG CTTCGACGCG CAGTCGAACA GCTACTCGTG GGAGACCTGG AAGTACCAGG GCGTGGACGG CATCGTCCCG GCGGCGGGGC ACAAGCTCGT GTACGGCGAG GAGGGCGCCG GCCGCGGCGA CCTGCGCGGC ACCAAGATGC TGGAGCGCGA GACCGACCCG ACGCTCCAGC ACCCGCGCTG CGTGTTCCAG CTGCTGAAGA AGCACTTCGC CCGCTACACG CCGGAGATGG TCGAGGAGAC CTGCGGGATC CCGCGGGCGC TGTTCCTGAA GGTGGCCGAG ACGCTGGGCC GGAACTCCGG GCGCGAGCGC ACCGGCGCGT TCTGCTACGC GGTCGGCTGG ACGCAGCACA CCGTGGGCGT GCAGTACATC CGCACCGCGG CCATCCTGCA GCTGCTGCTC GGCAACATCG GCCGGCCCGG CGGCGGGATC ATGGCGCTGC GCGGCCACGC GTCGATCCAG GGCTCCACCG ACATCCCGAC GCTGTTCGAC ATCCTGCCCG GCTACCTGCC CATGCCGCAC GCGTCGCTGC CGAACCGCGG CCTGGACCAG TACGTGAACA ACAACGCCTC GGCCACGCAC TGGTGGAGCG AGTTCCGCAA GTACGTGGTC TCGCTCTGCA AGGCCTGGTT CGGCACCGCC GCCACCCCGG AGAACGACTT CCTGTTCGAC CTGCTGCCGC GCCTGACCGG GAACCACTCG CACATGGTGA CCGTGTCCGA GATGGCCGAC GGGAAGCTGA AGGGCTACTT CGTGATGGGC GAGAACCCCA CCGTCGGCTC GATGCACGGC GCGCTGCACC GCAAGGGCCT GCGCGAGCTC GACTGGCTGG TGGTGCGCGA CTTCACGCTC ACCGAGACCG CGGAGTTCTG GCGCACCGCC CCGGAGATCG CCCGCGGCGA GGTCCGGACG GAGGAGATCC GCACCGAGGT GTTCTTCTTC CCGGCCGCCA CGCACACCGA GAAGGACGGC TCCTTCACCA ACACGCAGCG CATGCTGCAG TGGCACCACC GGGCGGTCGA GCCACGCGGC GACTGCCGCA GCGAGCTGCA CTTCACCTAC CACCTCGGCA AGCGCCTGAA GGCGCTCTAC GCCGGGTCCA CCGACCCGAA GGATCGCGCG ATCCAGGCGC TGACCTGGGA CTACCCCACC CGCGGCCCGC AGGAGGACCC CGACGCCGAG GCGGTGCTGC GCGAGGTGAA CGGGTTCACC GTGGCGGACG GCATGCCGGT GCCCGGCTTC GCCGAGCTGA AGGACGACGG CTCCACCGCC TGCGGCTGCT GGATCTACTC CGGCTGCTTC CGGGACGGGG TGAACCAGAC CGCGCGCCGC CGGCCCGAGC GCGAGCAGCA CTGGGTGGCG CCGGACTGGG GCTGGGCCTG GCCCGCCAAC CGCCGCATCC TCTACAACCG CACCTCGGCC GATCCCGAGG GCCGGCCGTG GTCGGAGCGG AAGCGCTACG TCTGGTGGGA CGAGGAGAAG CGGCAGTGGA CCGGCTACGA CGTGCCGGAC TTCGTGAAGG ACCGACCGCC CTCCTACCGC CCGCCGCCCG GGGCCCGCGG CACCGCGGCC ATCGCCGGCG ACGACGCGTT CATCATGCAG GCCGACGGGA AGGGCTGGCT GTTCGCGCCG TCCGGCCTCC TCGACGGCCC GTTCCCGACG CACTACGAGC CGGAGGAGTC GGTCCTCGAG AACCCGCTCT ACCCGCAGCA GTGCAACCCG GCGCGGATGG AGTGGCACCG GCGGGACAAC CCGTACCACG CCGCCTGGGG CGACCCGCGC TTCCCGTTCG TGCTCACCAC CTACCGGCTC ACCGAGCACC ACACCGCGGG CGGGATGAGC CGCTGGCTCT CGTGGCTGTC CGAGCTGCAG CCCGAGATGT TCTGCGAGGT CTCCCGCGAG CTGGCCGCAG CGCGCGGGCT CCGCAACGGC GGCTGGGCCA CCATCACCAC CGCCCGCGGC GAGATCGAGT GCCGGGTCCT GGTCACCGAC CGCATGCGCC CGCTCCGGGT GAAGGGCGGC CGGACCGTCC ACACCATCGG CCTGCCCTAC CACTGGAGCT TCGTGGGCCG GGTCACCGGC GATCCGGCGA ACGAGCTCAT CGGCTTCGTG GCGGATCCCA ACGTCAGCAT CCAGGAGTCG AAGGCGTTCA CCGGCGACAT CCGCGCCGGC CGCCACGCGC GCGGCCGCCG CTCCGTCACC GACGGCGTCG CGCTGCGCGA GCCCGAGCCG CGGATCCACG CGCCGCGCGA CCTGCCCGGC CTGCACACGA ACAAGCGCAG TCCACCGGTC GAGCCGCCCG AGCCCCGCTG A

Product

ProductfdhA 1
Descriptionformate dehydrogenase
Modifications586..588,aa:Sec
MPKLPVLSDW PVLRQLRHRD PSGLGSTAAS PRTRSLAPRT ASADRVARSI CPYCAVGCGQ LVYVKDEKII DIEGDPDSPV SQGCLCPKGA ATFQLVTGAH RLEQVLYRRP GGTSWETLPL EQAMEMVAQR VKKARDETWQ ERVEEEGAEH HGDQVRRTLG IAHLGGATLD NEENYLLKKL FTALGVVQVE NQARIUHSST VPGLGISFGR GGATTFPGDL QNSDWIVVQG SNMAECHPVA FRWVMEAKNR GATIIHVDPR FTRTSAVSDL HVPIRPGSDI AFLGGIIHHV LEHDLWFEEY VRAYTNASTV IDEGFRDTEE LEGFFSGFDA QSNSYSWETW KYQGVDGIVP AAGHKLVYGE EGAGRGDLRG TKMLERETDP TLQHPRCVFQ LLKKHFARYT PEMVEETCGI PRALFLKVAE TLGRNSGRER TGAFCYAVGW TQHTVGVQYI RTAAILQLLL GNIGRPGGGI MALRGHASIQ GSTDIPTLFD ILPGYLPMPH ASLPNRGLDQ YVNNNASATH WWSEFRKYVV SLCKAWFGTA ATPENDFLFD LLPRLTGNHS HMVTVSEMAD GKLKGYFVMG ENPTVGSMHG ALHRKGLREL DWLVVRDFTL TETAEFWRTA PEIARGEVRT EEIRTEVFFF PAATHTEKDG SFTNTQRMLQ WHHRAVEPRG DCRSELHFTY HLGKRLKALY AGSTDPKDRA IQALTWDYPT RGPQEDPDAE AVLREVNGFT VADGMPVPGF AELKDDGSTA CGCWIYSGCF RDGVNQTARR RPEREQHWVA PDWGWAWPAN RRILYNRTSA DPEGRPWSER KRYVWWDEEK RQWTGYDVPD FVKDRPPSYR PPPGARGTAA IAGDDAFIMQ ADGKGWLFAP SGLLDGPFPT HYEPEESVLE NPLYPQQCNP ARMEWHRRDN PYHAAWGDPR FPFVLTTYRL TEHHTAGGMS RWLSWLSELQ PEMFCEVSRE LAAARGLRNG GWATITTARG EIECRVLVTD RMRPLRVKGG RTVHTIGLPY HWSFVGRVTG DPANELIGFV ADPNVSIQES KAFTGDIRAG RHARGRRSVT DGVALREPEP RIHAPRDLPG LHTNKRSPPV EPPEPR