Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201204"

Accession numberr201204 [export]
Locus nameGrdB 5
DescriptionGrdB 5
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium bolteae [details]

Sequence

GenBank IDs
SequenceDNA of 1308 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon
ATGTCAAAGT TAAGAATTGT TCATTATATT AACCAGTTCT TCGCTAACAT CGGCGGCGAG GAAAAGGCTG ATTACCAGCC AGAATTAAGA GAAGGCATTG TAGGCCCTGG TATGGCGTTC AACCAGGCAT TTGGAGAAGA AGCAGAAATC GTAGCTACCG TTATCTGCGG TGACTCCTAT TTCAACGAGA ACGTTGAAGC TGCTAAAAAG ACCATTCTGG ATATGATCAG CAGCCAGAAG CCAGACGCAG TTATCTGCGG ACCGGCATTC AATGCAGGAC GTTACGGCGT TGCCTGCGGT ACTGTTGCAC TGGCAGTTAA GGAAGAGTTA AACCTTCCGG TTCTGACTGG TATGTACAAA GAGAACCCAG GCGCTGACAT GTACAAGACC AAAGTATATG TGGTTGAGAC CAAGAACAGC GCAGCCGGCA TGAGAAGTGC AGTTGCCACC ATGGCTCCTC TGGCACTTAA GCTTGCCAAG GGTGAGAAGC TTGGTTCTTC CAAGGAAGAG GGCTATATGC CAAACGGCAT CCGTGTCAAC TTCTTTGAGG ACAAGAGAGG CTCTCAGAGA GCAGTAGAGA TGCTGATTAA GAAGCTGTCC GGCAAGGAAT TCACAACCGA GTTCCCAATG CCTGACTTCG ACAGAGTAGA TCCGAATCCG GCTGTTAAAG ATATGGCTCA TGCAAAAATC GCTCTGGTTA CCTCCGGCGG TATCGTACCA AAGGGCAACC CGGACCACAT CGAGTCCTCC AGTGCTTCCA AGTACGGCAA GTATGACATC GACGGTGTCA TGGACCTGAC AGAAGCTACC TATGAGACTG CTCATGGCGG ATATGATCCA GTATACGCAA ACGAAGACGC AGACAGAGTC CTTCCTGTTG ACGTTTTAAG AGAATTTGAA AAAGAAGGAA AAATCGGCAG CCTGCACAGA TATTTCTATA CCACAGTTGG AAACGGTACA TCCGTAGCTA ACTCCAAGAG ATTCGCTGCA GAGTTCGCAC AGGAGCTGAG GAATGACGGG GTAGATGCGG TCATTCTGAC CTCTACCTGA GGTACCTGTA CACGTTGCGG TGCAACGATG GTAAAAGAAA TTGAAAGAGC AGGAATCCCT GTAGTTCATA TTGCAACTGT AGTTCCGATT TCACTGACAG TAGGAGCTAA CCGTATTGTT CCTGCTATCG CTATTCCTCA TCCTCTTGGC AATCCTGCAT TGACCATGGA AGAAGAGAAG GAAATCAGGA GACATATACT GACCAAGGCT CTGACAGCAC TGGAGACTCC GGTTACAGAG CAGACTGTGT TTGAGTAA

Product

ProductGrdB 5
DescriptionGrdB 5
Modifications1048..1050,aa:Sec
MSKLRIVHYI NQFFANIGGE EKADYQPELR EGIVGPGMAF NQAFGEEAEI VATVICGDSY FNENVEAAKK TILDMISSQK PDAVICGPAF NAGRYGVACG TVALAVKEEL NLPVLTGMYK ENPGADMYKT KVYVVETKNS AAGMRSAVAT MAPLALKLAK GEKLGSSKEE GYMPNGIRVN FFEDKRGSQR AVEMLIKKLS GKEFTTEFPM PDFDRVDPNP AVKDMAHAKI ALVTSGGIVP KGNPDHIESS SASKYGKYDI DGVMDLTEAT YETAHGGYDP VYANEDADRV LPVDVLREFE KEGKIGSLHR YFYTTVGNGT SVANSKRFAA EFAQELRNDG VDAVILTSTU GTCTRCGATM VKEIERAGIP VVHIATVVPI SLTVGANRIV PAIAIPHPLG NPALTMEEEK EIRRHILTKA LTALETPVTE QTVFE