Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201205"

Accession numberr201205 [export]
Locus nameGrdB 6
DescriptionGrdB 6
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium bolteae [details]

Sequence

GenBank IDs
SequenceDNA of 1311 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon
ATGGCTAAAT ATAAAATAGT ACATTATATT AACCAGTTCT TTGCCGGAAT CGGCGGTGAA GAAAAAGCCG ACTATACCCC TGAGCTTCGG GAAGGGGTTG TAGGACCAGG TATGGGACTT AAGGCTGCAC TGGGAGAGGA TTATGAAATC GTATCAACCA TTATCTGCGG TGACAACTAT TTCGGAGAGA ATCTGGACGC TGCAACCGAT ACCATTATTG AGATGGTAAA GAAATGTGAG CCTGATGTAT TCGTGGCAGG CCCTGCATTC AATGCCGGAC GTTACGGCGT TGCCTGCGGT ACTATCTGTA AGGCAGTGGA AGAGCGTCTG GGCATCCCGG TTATCACCGG TATGTATATC GAGAATCCTG GCGTGGATAT GTTCCGCAAG GACCTTATCA TTGTGGATAC ACCTAACTCC GCAGCCGGTA TGCCAAAGGT ACTTCCTGTT ATGTCCGCTC TGATTAAGAA GATGGCGGCC GGCGAGGAAA TCCTTGGGCC GAAGGAAGAA GGATACATCG AGAGAGGAAT CCGCGTAAAC TACTTCGCTG AGAAGAGAGG TTCTGAGCGC GCCCTTGAGA TGCTGGTTAA GAAGTTAAAA GGCGAGGAAT ACGGCACAGA CCTTCCTATG CCTAAATTTG ACAGAGTTGC GCCTGCTGAG CCTGTTAAGG ATATCAAGCA CGCAAAGATT GCAGTGGTTA CCTCCGGCGG TATCGTTCCA ACCGGTAACC CTGACCATAT CGAGTCCTCC AACGCCACCA AGTGGGGCAA GTATGACATC ACCGGTATGG ACCGTCTGTC AGCGGATGAA TTTACAACCA TCCACGGCGG ATATGACCGT CAGTTTGCTA TGGCCAACCC TAATGTGGTT GTTCCGTTAG ACGCATTAAG AGAACTGGAA AAAGCAGGCG AGTTCGGCGA GCTTGTGAAC TATTTCTGCA CTACTACCGG TACCGGAACT GCGACTGCAT CTGCAGCCAA GTTCGGCAGC GAGATTGGAC AGATGTTTAT TGATGAGCAT GTGGATGCGG TTATCCTCGT CTCTACCTGA GGTACCTGTA CTCGTTGCGG TGCAACGATG GTTAAGGGTA TCGAGAAATA CGGCATTCCG GTAGTTCACA TGGCTACTGT AGTTCCGATT TCACTGACAA TAGGCGCTAA CCGTATTATT CCTGGTATAG GCATTCCTTA TCCTCTGGGC GATCCGCCAC AGGGCGAGAA GGACAGCTAC AAACTCCGCT TATCCATGGT CAGAAGAGCT CTCAAAGCAC TTCAGACACC GGTTGATGGC CAGACTGTGT TTGAGAAATA A

Product

ProductGrdB 6
DescriptionGrdB 6
Modifications1048..1050,aa:Sec
MAKYKIVHYI NQFFAGIGGE EKADYTPELR EGVVGPGMGL KAALGEDYEI VSTIICGDNY FGENLDAATD TIIEMVKKCE PDVFVAGPAF NAGRYGVACG TICKAVEERL GIPVITGMYI ENPGVDMFRK DLIIVDTPNS AAGMPKVLPV MSALIKKMAA GEEILGPKEE GYIERGIRVN YFAEKRGSER ALEMLVKKLK GEEYGTDLPM PKFDRVAPAE PVKDIKHAKI AVVTSGGIVP TGNPDHIESS NATKWGKYDI TGMDRLSADE FTTIHGGYDR QFAMANPNVV VPLDALRELE KAGEFGELVN YFCTTTGTGT ATASAAKFGS EIGQMFIDEH VDAVILVSTU GTCTRCGATM VKGIEKYGIP VVHMATVVPI SLTIGANRII PGIGIPYPLG DPPQGEKDSY KLRLSMVRRA LKALQTPVDG QTVFEK