Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201214"

Accession numberr201214 [export]
Locus nameSelD
DescriptionSelD
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium difficile [details]

Sequence

GenBank IDs
SequenceDNA of 1047 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 49)
DescriptionSelenocysteine incorporation at UGA codon
ATGAAAAAAG AACAAAAAAA ACTTACAGAG ATGACAACAG CAGGTGGTTG AGCCGCTAAA ATAGGGCCAG AGGTTCTGGC ATCAGTTTTA TCTCAATTGC CTAAAAATGA TAATATAGAA AATTTATTAG TAGGACTAGA TACAGCAGAT GATGCTGCAG TTTATAAATT AAATGATGAT ATGGCACTTA TCCAAACTTT AGACTTCTTT ACACCAATGG TAGATGACCC ATACGTATTT GGTCAAATTG CTGCATCAAA TTCACTATCA GATGTATATG CTATGGGAGG CAAACCTTTG GTTGCTATGA ATATTGTTTG TTTTCCATCA TGCCATGATA TGGATGTACT TGCAGAAATA TTAAAAGGTG GGTTTGATAA AGTGAAAGAA AGTGGAGCAC TTTTGGTTGG AGGGCATACT GTAGATGACA AAGAGCCTAA ATATGGTCTT TCAGTTTCTG GGATTGTAAG TCCAAATAAA GTTTTATCAA ATGCTACTGC AAAACCTGGT GATAAGTTAA TTATAACAAA ACCAATTGGA GTGGGTGTAT TAAATACAGC CATGAAAGAA GGTATGGTAG AACAACATAT AGCAGATAAA GTAATAGAAA TAATGATACA TTTAAATAAA TATGCAGCAA TGAGTTTTGA GAAATTTGAT GTAAATTCGG TTACAGATAT AACTGGTTTT GGTCTACTTG GTCATACTTT AGAAATGGCC AAAGCTTCTG AAGTAAGTAT TGAAATTGAA TCAAAACATG TACCAATTAT TGAAGGTGCA ATAGAAATGG CACAAATGGG AATTATACCT GCTGGTATGT ATAAAAATAT GCATTATGTA TCTAAAGATG TAGAAGTTGT AGGAAATATA GAAGTTGCAG TTCAAGATAT TTTATACGAC CCACAAACAT CAGGAGGGTT GTTAATTTCA GTAAAAGAAG AACTTGCAGA GGAACTTGTA AAAGATATGA AATTAAATGG AGCAATAGAA GCTAAAATTA TAGGTTCTGT AGTTCCAAAA GGGGAAAAAT ATATTACAGT TTTATAA

Product

ProductSelD
DescriptionSelD
Modifications49..51,aa:Sec
MKKEQKKLTE MTTAGGUAAK IGPEVLASVL SQLPKNDNIE NLLVGLDTAD DAAVYKLNDD MALIQTLDFF TPMVDDPYVF GQIAASNSLS DVYAMGGKPL VAMNIVCFPS CHDMDVLAEI LKGGFDKVKE SGALLVGGHT VDDKEPKYGL SVSGIVSPNK VLSNATAKPG DKLIITKPIG VGVLNTAMKE GMVEQHIADK VIEIMIHLNK YAAMSFEKFD VNSVTDITGF GLLGHTLEMA K