Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201219"

Accession numberr201219 [export]
Locus nameUshA
DescriptionUshA
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 645 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 133)
DescriptionSelenocysteine incorporation at UGA codon
ATGCGGTTTT TTTCTATTTT TTGCTCTCTT TTTGCGGTGT TTCTCTATCA TGCGCCGGCA AACGCAACAG CAAGTCAAGA TATACGGGTC ATATTTAGCA GCAATCTCCT GGGCCAGATA GGTAATACTG GCTGAGCGAT AAATAAGCTA GGCGGTCTGT CTAGGCATGC GTCACTCTTA AATAAACTCA CTGCAGATTC AAGCAAGATC CCTATTATTG TTGAATCGGG CAATCTACTC TTTAAAACAT CCCAGAGTTC AAAAAACACT CTGGCCCAAA AAAAGGCGCG AAAAATTGCC CGTGCCTTTA GAAAGATGGG CTATACAGCT ATTTGTGCAG GAAGTTTTGA CTTGGCTGGC CACTATGCCG AAAGCATTGC CTTACCTCAA AATTCACAGA TGCCATTTAT TTCACTGAAT ATTGTGGGAG ATGGGGAAAA AACATTCTTT ACCCCATATA CCACGGTAAA GGCGGGGAAT CTTAATATTG GCATTACCGC CCTGAGCAAA AAGACCAAGG GTAAAGATCG GTTACTGGTT GATTCATGGC GGGCGGTACT GAAAAAACAG CTTCCTCTTA TGAAGAAAAA GTTTGATTTT ATCATTCTCC TCTCCGAGCT TTCCACCAGG AGAACATGGA AATAG

Product

ProductUshA
DescriptionUshA
Modifications133..135,aa:Sec
MRFFSIFCSL FAVFLYHAPA NATASQDIRV IFSSNLLGQI GNTGUAINKL GGLSRHASLL NKLTADSSKI PIIVESGNLL FKTSQSSKNT LAQKKARKIA RAFRKMGYTA ICAGSFDLAG HYAESIALPQ NSQMPFISLN IVGDGEKTFF TPYTTVKAGN LNIGITALSK KTKGKDRLLV DSWRAVLKKQ LPLMKKKFDF IILLSELSTR RTWK