Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201222"

Accession numberr201222 [export]
Locus namefdhA 1
DescriptionfdhA 1
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 2085 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 400)
DescriptionSelenocysteine incorporation at UGA codon
ATGCAAAAAA CACTGACAAC CTGTCCTTAC TGTGGCTCAG GGTGCACATT TTTTTTAGAA GTAGAGAATA ATACTATTAC CGGGGTTAGC CCAAACAGAG TGAGGGCGGT AAATAATGGC TCTCTCTGTT CCAAAGGACA TTTTGGTACG GATTTTGTGC ACAGCAAAGA TCGCCTAACC AAACCACTGA TCAGAAAAAA AGGTGTTCTC ACCCCCGTCA GTTGGCAGGA GGCATATAGC TATACGGCTC AACGTCTTCT CCAAATTTCA GAAGAGCATG GGGCTCAGGC CATTGCTGGA TTTAGTTCTG CCCGCTGTAC CAACGAAGAA AATTACCTCT TTCAAAAGAT GATGCGGGCA GCACTTGGCA CCAACTCCGT TGATCATTGC GCCCGTCTCT GACATGCTCC CACCGTGGCC GGTCTGACCA CAACACTTGG AAGCGGGGCG ATGACCAACT CCATTGCAGA GCTTGATACC ATGGGGGCAG GTGATACGAT TTTTGCCATC GGCACCAACA CGACGGAGTG TCATCCTATT ATTGGTCTTG GTATGCTTCG GGCCGTCAAA CGTGGTGCCC GGCTTATTGT GGCTGACCCT CGGGCGACCA CCCTTACCCA ACACGCAGAG GTATGGCTTC GTCTTCAGCC CGGCAGTGAT GTTGCCCTTC TCAATGCTCT GGGCCATCTT ATTCTGCGTG ATGGCTTGGA AGACAGGGTC TATATTGATG CTCACACGGA AAATTTTTCT GCCTATAGGT CATTTGTGGA AAAAATATCC CTTGCCGAGG CTGAGAGCAT AACAGCTGTG GCATTGGCTG ATATGGAGAA GGCGGCTCGT ATTCTTGGCG AATCCGCCAA TGTGGCTACC TATTATACCA TGGGGATAAC CCAGCACACC TCCGGAGTGG ATAACGTGAT GGCTGTCTCT AATGTTGCCA TTCTTACTGG TAATATTGGT CGTGCTAAAA CAGGGGTAAA CCCCCTGCGT GGACAAAATA ATGTCCAGGG GGCTTGCGAT ATGGGGGCCC TACCCGATGT ATTTCCTGGC TATCAGAAGG TGAGCCGACC AGAGATTGTG GAGAAATTTT CTAGGGCCTG GGGGGTCGAG CTCTCGGCGC GTCCAGGGAT TACTATTCCC TCTGTTCTAA GCGGGATAGA ACGAGATGAG GTGAAGGCTC TCTATGTCTT TGGCGAAAAC CCTCTGCGCA GTGACCCTGA TATTAACCAC GTTAAGCACT GTCTGGAACA GGTGGAGTTT CTCGTGGTGC AGGATATTTT TCTCACGGAA ACAGCAGCGC TTGCCGATGT GGTCTTTCCC GGAACCACAT TTGCTGAAAA AGATGGCACC TTCAGCAGTA CAGAGCGTAG GGTACAGCGC GTTCGTCGGG CGGTTGATCC CATTGGTGAG AGCAGGCCAG ATTGGCAAAT CATCAGCGAG TTGATGGTGG CTCTGGGGTA TCCCTCGTCC TATACCCATC CTCGGGAGAT CTTTGCCGAG ATGCGATCTC TTACCCCTAC CTATGCCGGT ATTACCTATG AACGGTTGGA GAATGAATCT CTGCAGTGGC CCTGTCCCCA TGAAAATCAT CCCGGTACAC CGGTCTTACA TGTGGGTGGG GCTATTCGTG GCCTGGCCCG TTTTGAGCCT GCCCAACATA GGCAACCCGC CGAGGTACCA GACACAGATT ATCCCCTGAA ACTGACAACC GGCCGTGTTG TTGCTCATTA CCATACCGGA ACCATGACTC GTCGTTGTTG GGGGCTGAAT GGGGTAGCAC CCCATGAGTT GGTTGAGATC CATCCCCATG ATGCTCTCTG TCTGGGCATT ATTGATGGTG ATCTGGTTCG GGTGGCCTCG CGGCGTGGAG CAGTAGAGGC CAGGGCCCAG GTAACGACTC GGGTAATTCA GGGTCTTGTT TTTATGACAT TTCACTATAC GGAAAGTTCG GGAAATATGC TGACCAATAG CGCCGCCGAT CCTATAACTC AGACACCGGA ACTGAAAATA TGCGCTGTCT CTGTACAAAA GGTAGAGAGG AAGGCTGTAT CCCCCCATAA TAGAAGAAAG AGGCAGATGG TATGA

Product

ProductfdhA 1
DescriptionfdhA 1
Modifications400..402,aa:Sec
MQKTLTTCPY CGSGCTFFLE VENNTITGVS PNRVRAVNNG SLCSKGHFGT DFVHSKDRLT KPLIRKKGVL TPVSWQEAYS YTAQRLLQIS EEHGAQAIAG FSSARCTNEE NYLFQKMMRA ALGTNSVDHC ARLUHAPTVA GLTTTLGSGA MTNSIAELDT MGAGDTIFAI GTNTTECHPI IGLGMLRAVK RGARLIVADP RATTLTQHAE VWLRLQPGSD VALLNALGHL ILRDGLEDRV YIDAHTENFS AYRSFVEKIS LAEAESITAV ALADMEKAAR ILGESANVAT YYTMGITQHT SGVDNVMAVS NVAILTGNIG RAKTGVNPLR GQNNVQGACD MGALPDVFPG YQKVSRPEIV EKFSRAWGVE LSARPGITIP SVLSGIERDE VKALYVFGEN PLRSDPDINH VKHCLEQVEF LVVQDIFLTE TAALADVVFP GTTFAEKDGT FSSTERRVQR VRRAVDPIGE SRPDWQIISE LMVALGYPSS YTHPREIFAE MRSLTPTYAG ITYERLENES LQWPCPHENH PGTPVLHVGG AIRGLARFEP AQHRQPAEVP DTDYPLKLTT GRVVAHYHTG TMTRRCWGLN GVAPHELVEI HPHDALCLGI IDGDLVRVAS RRGAVEARAQ VTTRVIQGLV FMTFHYTESS GNMLTNSAAD PITQTPELKI CAVSVQKVER KAVSPHNRRK RQMV