Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201223"

Accession numberr201223 [export]
Locus namefdhA 2
DescriptionfdhA 2
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 2664 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1036)
DescriptionSelenocysteine incorporation at UGA codon
ATGAAGAAAG TAACACTAAC GATTAACGGC CGTTCCGTAA CTGCCCCCGA GGGGAGCTAT GTCCTCCAGG CTGCCCTGCA GAAGGGAATC TATATCCCCC ATCTCTGCTA CCATAACGAT CTCGAACCAG TGGGAGCCTG TCGCCTCTGC ACCGTGCGGG TAAACGGTCG TTGGGATGCC CTCTCCTGCA AGACCCCCGT GGAAGAAGGC ATGGTCATTG AGACAGAGAC AGAGACAATT GCCAAAACCC GAAAAATTGC CATTGAACTG CTCATTGCCG ACCATGACAT GGACTGTCTG GCCTGTGCCC GCAACACCAC CTGCAAACTC CAGCAGGCAG CAGACTATAT CGGGGTGAAC AAAAAACATC TGGCTCGCCT GAAAAAGCCG GAGGTACTTC TGCCCATAGA TGACTCCAAC CCGTTTTTTG ACTTCGATCC CAATAGATGC GTGCTCTGCG GTATCTGCAT ACGTACCTGT GACGAATTGC AAAACATCAA CGCCATCGAC TTTGCCTACC GTGGTCTGAC AACCAAGGTA GCCGGTTTTG GCGACAAGGC CAGGATCCTC TCTAACTGCG AATCCTGCGG AGAATGTGTT GCCCGCTGTC CGGTGGGAGC CCTTACTGAA AAAGATTATG TTAAGCCGAG CCACTGGGTT AAAACCGTCT GCGCCTACTG TGGCTGTGGA TGTGGACTTG ATCTGGGGGT ACGCGATAAC AAGATAGTAA GCGCCCGGGG CGAACATGGT AATCCAGCCA ATAGGGGCCG CCTCTGCGTT AAGGGCCGCT TTGGTTTTAA CTATGTCAAC TCAAAGGAAC GACTCACCAC CCCCATGGTG CGCAGGCCCG AAGGTTTTGT GCCGGTAAGC TGGGATGAGG CCCTTGATCT CATTGCCGAC AATTTTGCCA AGAACAAGGG TGATAGCTTT GCCGCAGTCT CCTCTGCCAA ATGCACCAAC GAGGAAAACT ACCTCCTGCA AAAATTTACC CGCACGGTGA TGAAAACCAA CAATATAGAT CACTGCGCCC GTTTGTGACA CGCTCCCACC GTGGCCGGTC TGGCCACTGC TTTTGGAAGC GGCGCAATGA CAAACTCCAT TGCCGAAATT GGCGATGCTC AGGTAATCCT GGCGATTGGT ACCAATACCA CCGCCGCCCA TCCAATTATC GCCCTGCAGA TAAAGGATGC TGTTCGCCGA GGCGCAAAGC TGATTGTTAT CAATCCGAAA AGAATTGATC TCTGTAAACA TGCCCATATC TTCCTGCAGA ATACCCCGGG TTCCGACATT CCACTGCTGA TGACAATGAT GCGCATTATC GTAGAGGAAG ACCTGATTGA TAAGGAGTTC ATCGAAGAAC GCTGTGAAAA CTACCCTGCC TTCCTCGCCT CCCTGCAACA ATTCGAACTG GAGGATGTGG CAGAACTCAC AGGAATCCCA GCCGAAACAA TCCGAGAGGC AGCCCTCTGC TACGCAACAG AGTCACCTGC CACAATTCTC TACTGCATGG GCATCACCCA ACATGTACAC GGCACCGACA ATGTTCTTGC CACCAGTAAT CTCGCCCTAC TTACCGGAAA CGTAGGCAAG GAGTCAACGG GCGTTAATCC CCTGCGCGGG CAAAACAATG TGCAGGGATC CTGTGATATG GGAGCCCTCC CCGACGTCTA TCCAGGCTAT CAAAAAGTTG TCAACAACAC GGCAGCCTTT GAAGAGAAGT GGCAGACATC GCTTTCCGCA GTGCCGGGCA AGACCCATAC AGAGATCTTT GACGGCCTCT ACGATGGCTC CATCAAATCC GTTTATCTCA TCGGTGAAAA CCCCGTACTC AGTGAGGCCA ATGCCAGCCA TGCCATCGAG GCCATGAACA GGGCAAAATT CCTGGTAGTT CAAGACATCT TCTTTTCTGA GACAGCTGAA CTGGCAGACG TCATCTTACC CGCCAGCAGC TTTGCAGAAA AGGACGGTAC CTTCACCAAC ACCGAACGAC GGGTGCAACG GGTACGCCAG GCAATTGAAC CGGTGGGTGA TTCACGGCCC GATTGGTGGA TCATTAAAGA GATTGCGACA AGGATGGGAG CAAAGGGCTT TGACCATGAG GGACCGGAAC AGATCATGGA AGAGATTTCC GCCACTATTC CCAACTATGC GGGAATTAAC TATGACCGAC TCCAGCATGG CACCCTGCAG TGGCCATGTC CCAGCACCGA TCATCCGGGC ACCAAGTTCC TCCATGCCGA GCGTTTTGCC ACAGCCAACG GCAGGGCACG TTTTATGCCC CTGAAGACGA GAAAAACCAC GGAACAGGTG GATAAGAAAT ATCCACTTCT CCTCAACACG GACCGCAGCC TCTTTCACTT TCATGGAACC ATGACCAGAA GGGTATTTGG CCTCAATGTC CTTGATCGCG GAGAAAATCT TATTATTCAC CCAGAGGATG CAGAAAAATT TTCACTGACG GATGGCGAGA TTGTGGAGGT TCGTTCCCGC AGGGGGGCTG TTAAGGTGGC TGTCGAAATT AATGACTCAT GTCGTCCCGG TAGCGTATCC ATGTCCTTTC ACTTTTCCGA AACTCCGACC AATATGCTGA CCTCGGGTGC CCTTGATCCC GTGGCCAAGA CACCGGGGAC TAAGATCTGT GCAGTGCAGA TAAACAAGCT TTAG

Product

ProductfdhA 2
DescriptionfdhA 2
Modifications1036..1038,aa:Sec
MKKVTLTING RSVTAPEGSY VLQAALQKGI YIPHLCYHND LEPVGACRLC TVRVNGRWDA LSCKTPVEEG MVIETETETI AKTRKIAIEL LIADHDMDCL ACARNTTCKL QQAADYIGVN KKHLARLKKP EVLLPIDDSN PFFDFDPNRC VLCGICIRTC DELQNINAID FAYRGLTTKV AGFGDKARIL SNCESCGECV ARCPVGALTE KDYVKPSHWV KTVCAYCGCG CGLDLGVRDN KIVSARGEHG NPANRGRLCV KGRFGFNYVN SKERLTTPMV RRPEGFVPVS WDEALDLIAD NFAKNKGDSF AAVSSAKCTN EENYLLQKFT RTVMKTNNID HCARLUHAPT VAGLATAFGS GAMTNSIAEI GDAQVILAIG TNTTAAHPII ALQIKDAVRR GAKLIVINPK RIDLCKHAHI FLQNTPGSDI PLLMTMMRII VEEDLIDKEF IEERCENYPA FLASLQQFEL EDVAELTGIP AETIREAALC YATESPATIL YCMGITQHVH GTDNVLATSN LALLTGNVGK ESTGVNPLRG QNNVQGSCDM GALPDVYPGY QKVVNNTAAF EEKWQTSLSA VPGKTHTEIF DGLYDGSIKS VYLIGENPVL SEANASHAIE AMNRAKFLVV QDIFFSETAE LADVILPASS FAEKDGTFTN TERRVQRVRQ AIEPVGDSRP DWWIIKEIAT RMGAKGFDHE GPEQIMEEIS ATIPNYAGIN YDRLQHGTLQ WPCPSTDHPG TKFLHAERFA TANGRARFMP LKTRKTTEQV DKKYPLLLNT DRSLFHFHGT MTRRVFGLNV LDRGENLIIH PEDAEKFSLT DGEIVEVRSR RGAVKVAVEI NDSCRPGSVS MSFHFSETPT NMLTSGALDP VAKTPGTKIC AVQINKL