Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201224"

Accession numberr201224 [export]
Locus namefdhA 3
DescriptionfdhA 3
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 2790 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 592)
DescriptionSelenocysteine incorporation at UGA codon
ATGGCCAGAA GTCGAGTGAA TAAAGCAGTT GCCAGCACGG CAACTACCAG CAAACGGGTC ACCCTGAACC CAAAGGTTGC CAGGAGATCT TTTCTAAAGA TTTCTGCGGC AACAGCGGCA CTTACAGGGG CTGCGATGAC CACAAATCTC ACCAAGAAGG CAAGTGCTTC CGGTAAGAAA AGCCCCTATG AGGGCTCCAA AACAGTTCGT ACCATCTGCA CCTACTGTGC CGTTGGCTGT GGCATTGAGG CCGAGGTGCA CAACGGTGTC TGGGTGCGCC AGAACGTTGC GGTAGACCAT CCGGTTTCCC GTGGTGGCCA TTGCTGTAAA GGGGCAGGTG CCATTGATAT GGTAACTAGC CCTAAACGAA TGAAGAGCCC CATGAAACGG ATAAACGGAA AGTGGACGCC TATTTCCTGG GACCGGGCAA TGGGTGAGAT CACCGATAAA CTGAAGTCGA TTCGGGAAAA AGATGGCCCC GATGCCCTCC ACTTTAACGG TAGTGCCAAG GTCTCCAATG AAATGGCCTA TCAGATCAGA AAATTCGCAG CATTCTGGGG GTCGAATAAT ATCGATCACC AGGCCCGCAT CTGACACTCC GCAACGGTGG CAGGTGTCGC CAATACTTGG GGTTACGGTG CAATGACTAA TAGTCTTAAT GACATTAGGC ATGCGAAATC CATGATTTTT ATCGGTTCAA ATGCGGCAGA GGCACATCCT GTCTCCATGC AGCATATTCT TCACGCCAAA GAGAAGAACA ATGCGCCGAT TATTGTTGTT GATCCACGTC GAACAAAGCT TGCCGCCAAG GCCGATGAGT TTGTTCGTAT TCGTCCGGGC TCTGATGCTG CCTTTATGAT GGGACTGATC CACGTAATCG TCAAAAACGG TTGGGAAGAT AAGGAATTTA TTCGTACCCG TGTTTCCGGT TACGAAGAGA TGATTGAAGT CACAAAAAAA TATACTCCTG AAGAGGTAGA GGATGTAACG GGTATCCCCG CAGCCCAGAC CATCAAGGTT GCCAAGATGC TTGCAACCCA TCGCCCAACC AGTCTTACCT GGTGTATGGG TGGTACTCAG CATAGTATCG GCTCCAGCAT CACCAGAAGC TTCTGTCTGC TCCAGCTTGT CCTTGGCAAT ATGGGTAAAT CAGGTGGTGG TACCAACATT TTCCGTGGTC ACGACAATGT TCAGGGGGCA ACGGATATGT GTATTCTCTC CCATAGCCTA CCTGCCTACT ATGGTCTCTC CGACGGCGCC TGGAAACACT GGTGTCGCGT CTGGGGTGTG GATTACGAGT GGATGGTCTC ACGTTTTCCT GCAAAGGAGT GGATGAATAA AAAGGGATTC ACCCTTGCCC GCTGGTACGA AGGCGTACTG AACGAAGAAA AAATTCATCA GCCATCTCCC ATCAAGGCCC TTATCCAATG GGGATGTGGG GCCAACTCTA ATTCCCAGTA TGGTCGAGTA AAAAGAGCCT ATAACAAGCT TGATCTCCTG GTTATTGTTG ATCCTTTCCC CACCATGGCA GCGGCCCTCT GTGAAACAGA TAATGTCTAT ATTCTGCCCA GTGCCAGCCA GTACGAAACG CAAGGGTCAG TGAGTTCTAC CTCACGCCAA ATTCAATGGC GCTATAAGGT TGTTGATCCT ATCTACAACA GTCGAGATGA CTATGACATC CTTCGTGATT TCGTTACCCG TCTTGGTTTT GCTGATAAGT TTTACAAAAA CATCAAGCAG GAACCCGAAG ATATTACGCG TGAGCTGGGC AGTGGCTCAC TGACCATTGG TTATAACGGT CAGACGCCCG AGCGTATCAA GGCCCATATG GAGAACTGGC ATACCTTTGA TATCGATACC CTACAGGCTA AGGGTGGCCC ATGCGATGGC GAATATTACG GTCTGCCTTG GCCTTGCTGG ACCCAGGAAC ATCCGGGTAC TCCTATTCTC TACGATATGT CGAAGTCTGT GGCCGAAGGT GGTCTACCTT TTAGAAATCG TTTTGGTGTC GAAAAAACCT ATGATTCTGG TCGTACCGAA AACCAACTTG CAGCCGAGGG AACCTATACC CCAGGCAGTG AGGTAAAGGG TGGTTATCCT GAATTCAAAG ATGTGGTTCC AGGCACAAAC TGGAAGACAG ACCTCAGCCA GAAAACGATC AAGGATGCCA TTTCCCGTGG CATGGCACCA TTTGGTAATG CCCGGGCCCG CTGTATTGTC TGGACCTTTC CTGATCAGGT GCCTGTTCAC CGTGAGCCCC TACACTCACC ACGTCCGGAT CTGATAGAGC GATATCCAAC CTACCAGGAC CAGACGAATC ATTTCCGGGT TGATACCCGC TTTGAGTCAG AGCAAAACCC GAATCTGATA AAAGAGTTTC CATATATCCT CACCACAGGC CGACAGGTTG AGCATATGGG TGCGGGTGCC GAGACCCGAA GCAATCAGTA TCTAGCTGAA CTGCAGCCTG AAATGTACGC AGAGATTAAT CCCCGCCTGG CCAATAATCT TGGTATTCGT AAGGATGCAA TGATCTGGAT TGAATCCCCG GAGGGCGGCA AAATCAAGGT GAAGGCCTTT GTCACCGAAA GGGTGGACGA AAAAACTATC TTTTTACCAT ATCACTTTGG TGGTTCCTGG GAAGGCGAGT CTCTTGTTGA TAAGTATCCA GAGGGACATG CACCATGGGT TGTTGGTGAT TCAGCCAATG TTGTTGTCAA CTATGGATAT GATATCGTTA CTCAGATTCA GGCTACTAAA GATGGTCTCT GTAAAATCAG CTTGGCCTAA

Product

ProductfdhA 3
DescriptionfdhA 3
Modifications592..594,aa:Sec
MARSRVNKAV ASTATTSKRV TLNPKVARRS FLKISAATAA LTGAAMTTNL TKKASASGKK SPYEGSKTVR TICTYCAVGC GIEAEVHNGV WVRQNVAVDH PVSRGGHCCK GAGAIDMVTS PKRMKSPMKR INGKWTPISW DRAMGEITDK LKSIREKDGP DALHFNGSAK VSNEMAYQIR KFAAFWGSNN IDHQARIUHS ATVAGVANTW GYGAMTNSLN DIRHAKSMIF IGSNAAEAHP VSMQHILHAK EKNNAPIIVV DPRRTKLAAK ADEFVRIRPG SDAAFMMGLI HVIVKNGWED KEFIRTRVSG YEEMIEVTKK YTPEEVEDVT GIPAAQTIKV AKMLATHRPT SLTWCMGGTQ HSIGSSITRS FCLLQLVLGN MGKSGGGTNI FRGHDNVQGA TDMCILSHSL PAYYGLSDGA WKHWCRVWGV DYEWMVSRFP AKEWMNKKGF TLARWYEGVL NEEKIHQPSP IKALIQWGCG ANSNSQYGRV KRAYNKLDLL VIVDPFPTMA AALCETDNVY ILPSASQYET QGSVSSTSRQ IQWRYKVVDP IYNSRDDYDI LRDFVTRLGF ADKFYKNIKQ EPEDITRELG SGSLTIGYNG QTPERIKAHM ENWHTFDIDT LQAKGGPCDG EYYGLPWPCW TQEHPGTPIL YDMSKSVAEG GLPFRNRFGV EKTYDSGRTE NQLAAEGTYT PGSEVKGGYP EFKDVVPGTN WKTDLSQKTI KDAISRGMAP FGNARARCIV WTFPDQVPVH REPLHSPRPD LIERYPTYQD QTNHFRVDTR FESEQNPNLI KEFPYILTTG RQVEHMGAGA ETRSNQYLAE LQPEMYAEIN PRLANNLGIR KDAMIWIESP EGGKIKVKAF VTERVDEKTI FLPYHFGGSW EGESLVDKYP EGHAPWVVGD SANVVVNYGY DIVTQIQATK DGLCKISLA