Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201225"

Accession numberr201225 [export]
Locus namefdhA 4
DescriptionfdhA 4
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 2841 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 559)
DescriptionSelenocysteine incorporation at UGA codon
ATGATAAAAG AAACACTTAA TAATATGTCA GCAAAGATTG GTCGGAGATC TTTTTTAAAG CTTGCGGCTA TCGGGGCCGG GATGAGCGCC ACATCGGCAC TTGCCGCCAC CGATACCATC CGCCCTGCAA CCGACGAAGA GATAAAAAAT CCCTTTCCCG GCTCAAAGCT GGTCAAGACA GTCTGTAGTA TCTGCTCTGC CGGTTGCGGA ATTATAGCAG AAGTGCAAAA CGGAGTCTGG GTTCGTCAGG ATGTTGCTCA GGACAACCCT ATAAGTGAAG GCAGTCACTG CTGTAAGGGT ATTGATCAGA TTGATCTGAT CAAAAGCAAG CAACGCCTGA AACATCCCCT CAAGAAGGTT AATGGAGAGT GGAAAAGGAT TAGCTGGGAG CAGGCTGTTA ATGAAATCTC AGATAAAATG CTGGCATTAC GCAAAGAAAA TGGCCCGGAT GTGGCGATGT TTCTTGGCTC GGCTAAATTC AATCTGCAAC AGGCCTTCTA TTTTAGAAAA TTTGCCGCCA TGTGGGGTAC GAATAATATC GACCACGTAG CCCGTATCTG ACACTCCGCA ACAGTCGCCG GTGTGGCGAA CACGTGGGGT TACGGTGCTA TGACAAATCA TTTTGGTGAT GTTGTAGAAC ATTCAAAGGC TATGCTGATT ATCGGGGCAA ACCCCGCTGC AGCAAACCCT ATTGGCATGA AACATTTCTT ACAGGCTAAA GATCGCAACG CGGCTCCTCT TATCGTAGTC GATCCTGTCT ATACAAAAAC TGCAGCCAAG GCTGATCACT ATTTACGCAT TCGCTCGGGC ACCGATGTGG CCTTTGTTTA TGGATTACTG CACATAATCT TTAAAAATGG TTGGGAAGAT AAAAGCTTTC TTGAAAGCAG GGTCTACGGC ATTGAAGACA TTAAGGAAGA GGCGGCCAAG TGGACGCCGG AAGAGACCTC CAATGTCACA GGTATCCCTG CCGCACAGAT CATTCAGGTA GCAACAATCC TTGCAAAGAC CAAACCCACC ACCGTTGTCT GGGCCCTTGG TATTACCCAA CACAGCACAG GCACCTCCAA CACCAGAATC ATCCCTATCC TCCAGTTAGT ACTGGGAAAT ATGGGCAAGA AGGGTGGTGG TTGCAATATC ATTCGCGGCC ATGACAATGT TCAGGGTTCA ACGGATATGT GTTGCCTGGC CGACAGTCTA CCGGGCTACT ACGGTTTGTC CACCGGCTCC TGGAAGTACT TTGCCAAGGG TTGGGGAGTC GATTTCAAAT GGCTTGAGGA CAGATTTGCC GCGCCCGAAT GGATGCCTGC CAAGGGTTTC TCACTGGCAA AATGGTGGCA GGGCGTCCTC CAGGAGGAGA AGACCTACTC ATCAAGCCCC ATCAGGGCGC TATGGGTACA GGGTAACGGT ATCACCTCCA TGGCCCAGAC GGCAAAAATC CAGGAGGCCT TGGACAAGCT GGATCTCTTG GTTATCGCCG AACCCTTTGT CAACGAAGCT GCAGTCATCA CCAATAAAAA AGATAATATC TATATACTCC CCGTTGCCAC CCAGTTTGAA ACCGAGGGAA GTGTTACAGC AACCAATAGA ACCTCTCAAT GGCGAAGCAA GGTTGTCGAG CCCCTCTATG AAAGCAAACC CGATCACGAG GTGATGTTTG CCTTTGCCAA AAAGTTCGGC TTTTACGACG AGTACACTCG GGCAATGAAA ATGGGCATTA AGGACGGCGT TCTTACCCAA GTGAAAAAAG ACTTTGTCTG GCCCGATGAT GCCTCGGGTG AGATAGCACG GATTGTGAAG ACAATCGGCC TTGGTGGCTG GACAGCCAAG AGACTGCGCG AACATCAGGA AAACTGGCAC ATGTTCGACC CACTCACCCT TGCAGGTCGC GGCCCCATGA AGGGCCAATA TTACGGGCTT CCATGGCCCT GCTGGGATGA GAAACATCCA GGCAGCCCCG TCCTCTATGA CGTTGACACC CCGGTCAATG AAGGCGGCAT GGGATTTAGA AACAGATTTG GCCTTGAGCA TGAGGGCGTA AGTCAACTTG CAGGTGATGC AGTTACCGTC AAGGGTTCCA AGGTACCGGG TGGATATCCT GAAATCAGCA GGGACAACAT CGAAGAGGTG CTCAGCATCC AGCTTACAGC TGACGAAAAA TCAAAGATGG GTAAAAACTG GAAGGTGGAT TTCAGTGGTA TTATCCAGGA AAAATGTCGG GCTGCCGGCG TCGCCCCCTA TGGTAATGCC AGGGCACGGA CAATTGTCTG GACCTTCCCC GATCCTATCC CCAAACACCG GGAACCGATC CACTCGCCAA GACCTGATCT GGTAGAGAAG TATCCTACCT ACGAGGATCA AACCAATAAC TTCAGGGTCG ATGTCCGCTT TAAATCAGAA CAGCAGGCTC AAGACTGGGT AAAAGACTTC CCCACCATGC TGGTGACAAT GAGGGTGGTA AACCTGAGCG GGGCGGGAAT GTTGGAGAGA ACAAGCAAAT ACCTCTCACA TATAACTCCG GAGATGTTTG CCAATATCCA TCCTGATCTC GCCTTGGAAT ACGGCCTTCG TGATGGCGAT ATGATGTGGC TCCATGCACC TCAGGGCACC AAGATCAAGG TTAAGGCCCA GTATAACTTC AGTGTCACCC CCGACAGAAT TGCCCTGCCA TATAACTTCG CCGGCATGAT GCAGGGTGTC GATATGAGCC AGAACTACCC GGAGGGCACA AAACCTTATA GCATTGGTGA AAGTTCAAAC ACAATCACCA ATTACGGTTT CGATATTGTA TCGCAAATTC CTGAGTTTAA TGCAGGATTA TGTCGCATAG AAAAAGCATA A

Product

ProductfdhA 4
DescriptionfdhA 4
Modifications559..561,aa:Sec
MIKETLNNMS AKIGRRSFLK LAAIGAGMSA TSALAATDTI RPATDEEIKN PFPGSKLVKT VCSICSAGCG IIAEVQNGVW VRQDVAQDNP ISEGSHCCKG IDQIDLIKSK QRLKHPLKKV NGEWKRISWE QAVNEISDKM LALRKENGPD VAMFLGSAKF NLQQAFYFRK FAAMWGTNNI DHVARIUHSA TVAGVANTWG YGAMTNHFGD VVEHSKAMLI IGANPAAANP IGMKHFLQAK DRNAAPLIVV DPVYTKTAAK ADHYLRIRSG TDVAFVYGLL HIIFKNGWED KSFLESRVYG IEDIKEEAAK WTPEETSNVT GIPAAQIIQV ATILAKTKPT TVVWALGITQ HSTGTSNTRI IPILQLVLGN MGKKGGGCNI IRGHDNVQGS TDMCCLADSL PGYYGLSTGS WKYFAKGWGV DFKWLEDRFA APEWMPAKGF SLAKWWQGVL QEEKTYSSSP IRALWVQGNG ITSMAQTAKI QEALDKLDLL VIAEPFVNEA AVITNKKDNI YILPVATQFE TEGSVTATNR TSQWRSKVVE PLYESKPDHE VMFAFAKKFG FYDEYTRAMK MGIKDGVLTQ VKKDFVWPDD ASGEIARIVK TIGLGGWTAK RLREHQENWH MFDPLTLAGR GPMKGQYYGL PWPCWDEKHP GSPVLYDVDT PVNEGGMGFR NRFGLEHEGV SQLAGDAVTV KGSKVPGGYP EISRDNIEEV LSIQLTADEK SKMGKNWKVD FSGIIQEKCR AAGVAPYGNA RARTIVWTFP DPIPKHREPI HSPRPDLVEK YPTYEDQTNN FRVDVRFKSE QQAQDWVKDF PTMLVTMRVV NLSGAGMLER TSKYLSHITP EMFANIHPDL ALEYGLRDGD MMWLHAPQGT KIKVKAQYNF SVTPDRIALP YNFAGMMQGV DMSQNYPEGT KPYSIGESSN TITNYGFDIV SQIPEFNAGL CRIEKA