Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201228"

Accession numberr201228 [export]
Locus namehdrA
Descriptionheterodisulfide reductase, subunit A
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDesulfotalea psychrophila [details]

Sequence

GenBank IDs
SequenceDNA of 3057 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 181)
DescriptionSelenocysteine incorporation at UGA codon
ATGCTGGACA AGAAGAAGGT TGGGTCGGTA ATGATTGTGG GAGGTGGAGT AACGGGCATG CAGTCAGCCC TTGATCTCGC TGATGCCGGA TATTTCGTCT ACCTGATTGA AAAATCAGGT GCTATCGGCG GAGCCATGGC TCAGTTGGAT AAAACTTTTC CTACCAACGA TTGCTCGATG TGAATTATCG CGCCTAAATT GGTTGAGTGC GGTCGGCACT TAAATATAAA GTTGATGACT CTCAGTGAAG TAACTAATAT CGCAGGTTCT GCGGGTGACT TTACTGTAAC TGTAAAAGAA TCTCCACGTT ATGTGGATAT GGATAAATGT ATTGCCTGTG GTGCATGTAC TGATAAATGT CCGAAGAAGG TCGATAGCGA GTATGACGAA AAGACCGGAA AGCGTAAGGC CATTTTTGTA AAGTATGCCC AGGCGGTACC ACTTAAGTAT CAAATTGATC CTCTGAACTG TCTGCGTCTT ACCGCCATGC GTAATGGTAA GGAAAAACTT CCCTGTGGAT TTTGTGAGCA GGTTTGTGAC GCTGGCGCTA TTAACTATAA CGATACCGAA AAGACTCATG AGTTGAACGT AGGTGCTGTT GTTTTGGCTC CTGGCTTTGA GTCCCATGAT CCCACCGGAG ATGGTGTTTG GGGTTATGGC GTATATCCAA ACGTTATTAC CGCCATGCAA CTGGAGAGAT ATCTCTCTGC CTCTGGGCCA ACCGAGGGCC ATATAGTTCG TCCTTCCGAT GGACAGAAAG CGCGAAAAAT AGCATTTTTG CAATGTGTTG GCTCTCGTGA TCAGAATCTC TGTGATAATG GTTACTGCTC TTCTGTCTGT TGTATGTATG CGATAAAAGA AGCTGTTATG GCCAAGGAAC ATGTAGCAGG GCTTGAAACA GACATCTTCT ATATGGACAT GCGTACCCAT GGCAAAGAGT TTGATAAGTA CATGGAGAAA GCCAAAGAGA AATCAGGCGT ACGTTTCGTC CGATCTCGGG TAAATGGCGT TGAACCTCAG GGTGAGGCCG GTGATCTTCG TTTGAAGTAT ATGAACGAAA ATGGTCATCA AATAGAAGAG TGTTATGACA TGGTTGTCCT CTCTGTGGGC CTTCAAACTC CAAAGCATGT GTTGGAGCTT GCCAAGACTG CGGGTATTGA GATCACTAAG GATAACTTTG CCAAAACGCC AGATTTTGCT CCGGTCCAAA CCTCTCGTGA GGGTGTTTTT ACCTGTGGTG CCTTTGCCGG TCCTAAGGAT ATTCCTCAGT CTGTTGTTGA GGGTTCAGCG GCAGCTGCAG CGGTTGCTGA ACTGCTTGCC CCATCCCGTA ACCAGTTTAC CCACTCGGTA ACCTGGCCAG CAGAGCGTGA TATTCGTGAG GAAGAGCCGA AGGTTGGTGT CTTTATTTGT CATTGTGGTT CTAACATTGC CGGTGTGGTT GATGTGGCAG CGGTTGAAGA GTATGCCGCA ACCCTTCCTC ATGTGGCCTA TGTTGAGAGA AATCTCTTCT CCTGTTCTCA GGATGCTCAG GAAAAAATTG CGGCAACCAT TAAGGAACAG GGTCTTAACC GTATTGTTAT TGCCGCCTGT ACGCCACGAA CCCATGAGCC TCTGTTTCGT GAGACTCTGA AGGCAGCAGG GCTGAATGAA TACCTCGTTG AGATGGCTAA TATTAGAAAC CATGACTCCT GGGTTCATTC CGATAACCCT AAAATGGCAA CGATTAAGGC CAAGGATCTG ATACGGATGG CTGCTGCCAA GGTAGTCTTT GGTGAGTCTC TTAAGCCTAT CTCTGTACCC ATTAACCAGA CAGCTCTGAT TATCGGTGGT GGTGTAGCTG GAATGACTTC TGCCCTGAAT CTTGCCGAGC AGGGTTTTAA TGTTAATCTT GTGGAAAAAA GCGATACCCT TGGTGGTGCT GCTTTGAAGA TTAAGCATAC CTGGTCCGGT GAAGATGTTG CCTCTCAGGT GGCGACCCTT GTCGATAAGA TCACCTGGAA CGACAAGGTT ACCGTTTTCA AAGAATCTGA AGTTGTTGCA TCCGAAGGTT TTGTCGGTAA CTTCAAGTCA ACCATTCTCC ATGGCGGTGA AGATTACAAC GTTATCAAGC ACGGTGTTGG TATTGTGGCA ATTGGTGGAG TCGAGTACAA GCCAAACGAG TACGGTTACG GTGAAATTGC CGGGGTAAAG ACCAGTACTG AGTTTGATAA TACTCCCCTC AGCCCGTCTG CCAAGACCTT TGTCTTCATT CAATGTGTTG GTTCCCGAGA GGGAGACAAT ATGTACTGCT CTAAGGTTTG CTGTACCCAT TCTGTGCAGT CTGCCATTGA GCTGAAGGAA GCTGATCCGG CGCGTAATGT TTATATTCTC TATCGTGAGA TGCGTACCTA CGGTCAGCGT GAGGCATTGT ATCAAAAGGC TCGTAAACTT GGTGTTATAT TTATCAATTA CGAGAGTCAC GGTAAACCTG TGGTAAGTAC GGTTGATGGT GCTATTCGAG TGGATGTTTG GGATCATGTC TTGAACTGTC CGCTGAAGAT TATGGCAGAT AATTTGATCC TGGCTACAGC CGTTCGGCCA AGTACTGATG CCGGAGCTAT CTCTAAGCTG TACAAGGTGC CTGTTGATGC CGATGGCTTT TTTCTTGAGG CCCATGCCAA GTTGCGTCCC GTTGATTTTT CAACGGATGG AATGTATGTC GCAGGTATGG CCCATTATCC CAAGCCTATT GAAGAGTCTG TGGCTCAGGC ACTTGCCGCA GCTGCCCGGG CGGCAACGGT TCTCTCTAAG ACCGAGGTAA CACTTGATGC TGTGAAGGCC ACCGTTGATC CCGACTTTTG TGATGGCTGT GCCCTCTGTG TGGATGTTTG CCCATACGGT GCCATTACCC TTGGTTCCCG TTCGGATGAT CTGCCTAGTC GTATTATCAG CGTTAATGAG GCGAAGTGTA AAGGCTGTGG CTTATGTCAG GCGACATGTC CTAAGAGAGG CGTCTATGTT GCTGGATTTA CCATGCAACA GATAAGCAGT CAGATTGCTG CCGCTCTTGA GGTCTAG

Product

ProducthdrA
Descriptionheterodisulfide reductase, subunit A
Modifications181..183,aa:Sec
MLDKKKVGSV MIVGGGVTGM QSALDLADAG YFVYLIEKSG AIGGAMAQLD KTFPTNDCSM UIIAPKLVEC GRHLNIKLMT LSEVTNIAGS AGDFTVTVKE SPRYVDMDKC IACGACTDKC PKKVDSEYDE KTGKRKAIFV KYAQAVPLKY QIDPLNCLRL TAMRNGKEKL PCGFCEQVCD AGAINYNDTE KTHELNVGAV VLAPGFESHD PTGDGVWGYG VYPNVITAMQ LERYLSASGP TEGHIVRPSD GQKARKIAFL QCVGSRDQNL CDNGYCSSVC CMYAIKEAVM AKEHVAGLET DIFYMDMRTH GKEFDKYMEK AKEKSGVRFV RSRVNGVEPQ GEAGDLRLKY MNENGHQIEE CYDMVVLSVG LQTPKHVLEL AKTAGIEITK DNFAKTPDFA PVQTSREGVF TCGAFAGPKD IPQSVVEGSA AAAAVAELLA PSRNQFTHSV TWPAERDIRE EEPKVGVFIC HCGSNIAGVV DVAAVEEYAA TLPHVAYVER NLFSCSQDAQ EKIAATIKEQ GLNRIVIAAC TPRTHEPLFR ETLKAAGLNE YLVEMANIRN HDSWVHSDNP KMATIKAKDL IRMAAAKVVF GESLKPISVP INQTALIIGG GVAGMTSALN LAEQGFNVNL VEKSDTLGGA ALKIKHTWSG EDVASQVATL VDKITWNDKV TVFKESEVVA SEGFVGNFKS TILHGGEDYN VIKHGVGIVA IGGVEYKPNE YGYGEIAGVK TSTEFDNTPL SPSAKTFVFI QCVGSREGDN MYCSKVCCTH SVQSAIELKE ADPARNVYIL YREMRTYGQR EALYQKARKL GVIFINYESH GKPVVSTVDG AIRVDVWDHV LNCPLKIMAD NLILATAVRP STDAGAISKL YKVPVDADGF FLEAHAKLRP VDFSTDGMYV AGMAHYPKPI EESVAQALAA AARAATVLSK TEVTLDAVKA TVDPDFCDGC ALCVDVCPYG AITLGSRSDD LPSRIISVNE AKCKGCGLCQ ATCPKRGVYV AGFTMQQISS QIAAALEV