Recode v. 2.0 / Database of translational recoding events.

 

Details for "r201262"

Accession numberr201262 [export]
Locus nameGrdB
DescriptionGlycine reductase selenoprotein B
Recode statusReviewed

Organism

Genomic classBacteria (Chromosome)
OrganismDorea longicatena [details]

Sequence

GenBank IDs
SequenceDNA of 1311 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1051)
DescriptionSelenocysteine incorporation at UGA codon
ATGTCTAAGA TAAAAGTAGT TCATTATATC AACCAGTTCT TTGCACAGAT TGGTGGAGAG GAAAAAGCAG ACTATCCTGC AGAAATTCGT GTTGGGGAAG TTGTAGGACC TGGTCTGGCA CTGACACAGA ATTTTAAAGA TGAAGCAGAG ATTATTGCAA CAGTTATTTG CGGAGATTCT TACTTCAATG AGAACCTTGA AAAAGCAAAA GCAGATATTC TTGCAATGGT AAAAGAGCAG GCACCGGATG TATTTATTGC AGGACCGGCA TTCAACGCCG GTCGTTATGG CGTGGCTTGC GGTACAATTG CGGCAGCTGT TCAGGAGGAA CTTGGAATTC CTGCAGTTAC AGGTATGTAT GTAGAAAACC CTGGAGCAGA TATGTTCAAG AATGATGTCT ACATGATCTC AACAAAGAAC AGTGCGGCAG GTATGAGGGA TGCAGTGAAG AAACTTGCTC CGTTGGCAGT GAAACTGGCA AAAGGAGAAA AAATCGGTTC ATCTGCAGAA GAAGGATATA TCCCGAATGG TATCCGTGTG AATTTCTTCG AAAAAGAAAG AGGATCCAAA CGTGCGGTTA AGATGCTGAT CAAGAAATTG AATGACAAGC CATATGTAAC AGAATATCCG ATGCCGAATT TTGACAGAGT AGAACCAAAT CCGGCAGTGA AGGATCTTGC ACATGCGAAG ATTGCCCTGG TTACTTCCGG TGGTATCGTT CCAAAGGGAA ACCCGGACCA CATAGAAAGT TCAAGTGCTT CTCACTATGG AGAGTATGAT ATTACAGGAG TTACAGATCT TACAGAAGAG ACATATGAGA CTGCACATGG CGGATATGAT CCGGTATATG CGAATGAAGA TCCGGATCGT GTACTTCCGG TAGATGTTCT TCGCGATATG GAAAAAGAAG GTGTGATCGG ATCGCTTCAT CATCTGTTCT ATACAACTGT AGGAAATGGA ACATCTGTAG CATCCGCAAA AGCATTTGCA GCAGAGTATT CGCAGAAATT AAAGGCTGAC GGAGTAGATG CCGTTATCCT GACCTCCACC TGAGGTACCT GTACTCGTTG CGGTGCAACG ATGGTAAAAG AAATCGAAAG AGCAGGAATT CCTGTTGTAC ATATCTGTAC AGTTACTCCG ATTTCTATGA CAGTTGGTGC AAATAGAATC GTACCGGCGA TTGCTATTCC ACATCCACTC GGTAATCCGG CACTGGATCA GGAAGAAGAA AAGAAATTAC GCCGTGGAAT CGTAGAAAAA GCTCTGGAAG CTTTGACTAC GGAAGTTGAC GGACAGAAAG TTTTTGAATA G

Product

ProductGrdB
DescriptionGlycine reductase selenoprotein B
Modifications1051..1053,aa:Sec
MSKIKVVHYI NQFFAQIGGE EKADYPAEIR VGEVVGPGLA LTQNFKDEAE IIATVICGDS YFNENLEKAK ADILAMVKEQ APDVFIAGPA FNAGRYGVAC GTIAAAVQEE LGIPAVTGMY VENPGADMFK NDVYMISTKN SAAGMRDAVK KLAPLAVKLA KGEKIGSSAE EGYIPNGIRV NFFEKERGSK RAVKMLIKKL NDKPYVTEYP MPNFDRVEPN PAVKDLAHAK IALVTSGGIV PKGNPDHIES SSASHYGEYD ITGVTDLTEE TYETAHGGYD PVYANEDPDR VLPVDVLRDM EKEGVIGSLH HLFYTTVGNG TSVASAKAFA AEYSQKLKAD GVDAVILTST UGTCTRCGAT MVKEIERAGI PVVHICTVTP ISMTVGANRI VPAIAIPHPL GNPALDQEEE KKLRRGIVEK ALEALTTEVD GQKVFE