Recode v. 2.0 / Database of translational recoding events.
Details for "r201295"
| Accession number | r201295 [export] |
| Locus name | UGSC-containing |
| Description | UGSC-containing protein |
| Recode status | Reviewed |
Organism
| Genomic class | Bacteria (Chromosome) |
| Organism | Hyphomonas neptunium [details] |
Sequence
| GenBank IDs | |
| Sequence | DNA of 519 nucleotides [sequence] |
| Organisation | SECIS structure (1)
|
Recoding event
| Event type | Selenocysteine (position: 277) |
| Description | Selenocysteine incorporation at UGA codon |
ATGACAATAA TTCTCGATCC GACCGATGAG CGAAAGCCCG TCTCGCGTCA GGTCACGGCG CGCGCCGGAA
GCTTGAGCGG CACGGTTGGC CTGCTCGACA TCCGCAAGCC CCGCGGCAAC GTCCTGCTCG ACGAACTCGA
GCGGCAGCTG AAGGCGGCCG CGCCAGCGAT CACCGTGAAG CGCTTCGCCA AGCCCACTTT CACCAAGCCA
TGCCCCGATG ACCTGCGTCG CGACATCGCT GGCCAGGTCG ACTATCTGGT CGAAGCGCTG GCTGATTGAG
GTTCCTGTAC GACGTGCAGT CTGCACGACA CAGTCTGGTT TGAAATCCAG GGAATCCCAT CGGTCTCCAT
CGCTTCATCA GAGTTCGAAG AAGCTGCCAA TTTCCAGCGG AGCGCGCTCG GTATGCCGGA CGCCCGGTAT
GTTCTTGTGC CGCATCCTAT CCAGGATGCG ACAGACGATG AGATGCGGGC CAAGGCGAAG CAGGCGCTAT
CGGCTATTAT CGACGCTTTG ACGCGGTGA
Product
| Product | UGSC-containing |
| Description | UGSC-containing protein |
| Modifications | 277..279,aa:Sec |
MTIILDPTDE RKPVSRQVTA RAGSLSGTVG LLDIRKPRGN VLLDELERQL KAAAPAITVK RFAKPTFTKP
CPDDLRRDIA GQVDYLVEAL ADUGSCTTCS LHDTVWFEIQ GIPSVSIASS EFEEAANFQR SALGMPDARY
VLVPHPIQDA TDDEMRAKAK QALSAIIDAL TR
Publication
- Paulsen IT, Nelson KE, Khouri HM, Radune D, Sosa J, Dodson RJ, Sullivan SA, Rosovitz MJ, Madupu R, Brinkac LM, Durkin AS, Daugherty SC, Kothari SP, Giglio MG, Zhou L, Haft DH, Selengut JD, Davidsen TM, Yang Q, Zafar N, Ward NL. (2006) Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus. J Bacteriol. 188(19):6841-6850. [abstract]